RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 UQCRHP07919 91 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 PAEPP09466 180 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 EPB41P11171 864 aaKnown RBP9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 MYF5P13349 255 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 C6P13671 934 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 TACR2P21452 398 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 GLDCP23378 1020 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 GPD2P43304 727 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 CNTN1Q12860 1018 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 ILKQ13418 452 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 NNTQ13423 1086 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 PNOCQ13519 176 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 CNGA2Q16280 664 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 ZC3H12AQ5D1E8 599 aaKnown RBP9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 ANKRD40Q6AI12 368 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 C11orf57Q6ZUT1 292 aaPredicted RBP9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 MTERF4Q7Z6M4 381 aaKnown RBP9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 ARHGEF19Q8IW93 802 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 ELOA2Q8IYF1 753 aaPredicted RBP9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 LGI2Q8N0V4 545 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 CACTIN-AS1Q8N1I8 211 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 TMEM145Q8NBT3 493 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 ERCC4Q92889 916 aaPredicted RBP9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 FGF11Q92914 225 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 HIC2Q96JB3 615 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 SERPINB11Q96P15 392 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 TRIM5Q9C035 493 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 TJP2Q9UDY2 1190 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 IL17BQ9UHF5 180 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 SRPK3Q9UPE1 567 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 CLCA2Q9UQC9 943 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 U3KQA8 63 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 AHCTF1Q8WYP5 2266 aa9.48□□□□□ -0.89
CHMP4A-205ENST00000531158 TBC1D3DA0A087WVF3 549 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TBC1D3IA0A087WXS9 549 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TBC1D3EA0A087X179 549 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TBC1D3KA0A087X1G2 549 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TBC1D3FA6NER0 549 aaPredicted RBP9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 BECN2A8MW95 431 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TBC1D3LB9A6J9 549 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 CASC3O15234 703 aaKnown RBP9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 STX10O60499 249 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 CTSLP07711 333 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TBC1D3HP0C7X1 549 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 CDK4P11802 303 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 PDGFRAP16234 1089 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 FMO5P49326 533 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 PLK1P53350 603 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TPM4P67936 248 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 CENPCQ03188 943 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 LY6DQ14210 128 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TAF5Q15542 800 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 POM121L1PQ3SYA9 428 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 CDCP2Q5VXM1 449 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TBC1D3GQ6DHY5 549 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TBC1D3CQ6IPX1 549 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 DENND1BQ6P3S1 775 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 KDM7AQ6ZMT4 941 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 PRICKLE2Q7Z3G6 844 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 IQCHQ86VS3 1027 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TRIM69Q86WT6 500 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 TBC1D3Q8IZP1 549 aaPredicted RBP9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 CCAR2Q8N163 923 aaKnown RBP9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 SLC22A18ASQ8N1D0 253 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 ZNF557Q8N988 423 aaPredicted RBP9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 MYRIPQ8NFW9 859 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 BAP1Q92560 729 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 HSFY1Q96LI6 401 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 KREMEN1Q96MU8 473 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 NOX5Q96PH1 765 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 CPNE5Q9HCH3 593 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 ACP6Q9NPH0 428 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 KIAA1468Q9P260 1216 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 KIAA1257Q9ULG3 409 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 PPM1HQ9ULR3 514 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 OR51B4Q9Y5P0 310 aa9.47□□□□□ -0.89
CHMP4A-205ENST00000531158 ANKRD36A6QL64 1941 aa9.46□□□□□ -0.89
CHMP4A-205ENST00000531158 A0A1B0GVM2 712 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 PMS2P1A4D2B8 440 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 ENO4A6NNW6 628 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 KCNU1A8MYU2 1149 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 FBXO21O94952 628 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 ZNF202O95125 648 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 TRUB2O95900 331 aaKnown RBP9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 MT-CO3P00414 261 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 MPOP05164 745 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 PRLRP16471 622 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 DGKAP23743 735 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 TBXAS1P24557 533 aaPredicted RBP9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 GGCXP38435 758 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 GSDMDP57764 484 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 C1QBPQ07021 282 aaKnown RBP9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 ZNF211Q13398 564 aaPredicted RBP9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 COBLL1Q53SF7 1204 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 ARTNQ5T4W7 220 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 PIP5KL1Q5T9C9 394 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 Q6ZVU0 165 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 RRAGAQ7L523 313 aa9.46□□□□□ -0.9
CHMP4A-205ENST00000531158 CHSY1Q86X52 802 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms