RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 NUP62CLQ9H1M0 184 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 SAMSN1Q9NSI8 373 aaKnown RBP16.21■□□□□ 0.19
CPSF1-205ENST00000531042 PPM1HQ9ULR3 514 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 PKD1L2Q7Z442 2459 aa16.21■□□□□ 0.18
CPSF1-205ENST00000531042 NBEAQ8NFP9 2946 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 GOLGA8CPA6NN73 597 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 DRGXA6NNA5 263 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 PES1O00541 588 aaKnown RBP16.2■□□□□ 0.18
CPSF1-205ENST00000531042 SLC7A4O43246 635 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 PLRG1O43660 514 aaKnown RBP16.2■□□□□ 0.18
CPSF1-205ENST00000531042 RTN2O75298 545 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 UCHL3P15374 230 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 DEUP1Q05D60 604 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 SHBQ15464 509 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 INAVAQ3KP66 663 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 SLC25A52Q3SY17 297 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 ALFQ53S48 1182 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 FAM102AQ5T9C2 384 aaPredicted RBP16.2■□□□□ 0.18
CPSF1-205ENST00000531042 TAF3Q5VWG9 929 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 Q6ZVU0 165 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 PROSER1Q86XN7 944 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 PIP4K2CQ8TBX8 421 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 C1orf74Q96LT6 269 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 TBCBQ99426 244 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 PSMB7Q99436 277 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 MUC3BQ9H195 1237 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 TMEM51Q9NW97 253 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 ARHGAP20Q9P2F6 1191 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 HS3ST2Q9Y278 367 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 PAXBP1Q9Y5B6 917 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 SNX10Q9Y5X0 201 aa16.2■□□□□ 0.18
CPSF1-205ENST00000531042 COL5A1P20908 1838 aaPredicted RBP16.19■□□□□ 0.18
CPSF1-205ENST00000531042 ANKRD11Q6UB99 2663 aaPredicted RBP16.19■□□□□ 0.18
CPSF1-205ENST00000531042 FAM170AA1A519 330 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 C1QTNF3-AMACRE9PGA6 284 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 TLR4O00206 839 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 MT-CO1P00395 513 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 RHOCP08134 193 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 SRCP12931 536 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 ZNF18P17022 549 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 EEF1GP26641 437 aaKnown RBP16.19■□□□□ 0.18
CPSF1-205ENST00000531042 KRT83P78385 493 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 CNTN1Q12860 1018 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 C2CD6Q53TS8 623 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 SLC45A4Q5BKX6 768 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 TCP11X2Q5H9J9 407 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 CT47A1Q5JQC4 288 aaPredicted RBP16.19■□□□□ 0.18
CPSF1-205ENST00000531042 AGBL4Q5VU57 503 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 LRRC31Q6UY01 552 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 SETD3Q86TU7 594 aaPredicted RBP16.19■□□□□ 0.18
CPSF1-205ENST00000531042 NOP9Q86U38 636 aaKnown RBP16.19■□□□□ 0.18
CPSF1-205ENST00000531042 PRPF39Q86UA1 669 aaKnown RBP16.19■□□□□ 0.18
CPSF1-205ENST00000531042 GATAD2AQ86YP4 633 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 STK33Q9BYT3 514 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 GDF3Q9NR23 364 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 TMPRSS4Q9NRS4 437 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 FTSJ1Q9UET6 329 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 FAM208BQ5VWN6 2430 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 ITPR1Q14643 2758 aa16.19■□□□□ 0.18
CPSF1-205ENST00000531042 IGLV3-10A0A075B6K4 115 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 BNIP3LO60238 219 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 SNAP91O60641 907 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 LSM8O95777 96 aaKnown RBP16.18■□□□□ 0.18
CPSF1-205ENST00000531042 MMEP08473 750 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 NUDT1P36639 197 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 FLT3P36888 993 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 NXPH1P58417 271 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 POM121L1PQ3SYA9 428 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 ARTNQ5T4W7 220 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 ACBD5Q5T8D3 534 aaPredicted RBP16.18■□□□□ 0.18
CPSF1-205ENST00000531042 NAPEPLDQ6IQ20 393 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 TRNP1Q6NT89 227 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 BNIPLQ7Z465 357 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 TRIM69Q86WT6 500 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 GALNT15Q8N3T1 639 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 MFSD2AQ8NA29 543 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 ATP11CQ8NB49 1132 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 SAP25Q8TEE9 199 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 C2orf49Q9BVC5 232 aaPredicted RBP16.18■□□□□ 0.18
CPSF1-205ENST00000531042 CCDC86Q9H6F5 360 aaKnown RBP16.18■□□□□ 0.18
CPSF1-205ENST00000531042 MPP6Q9NZW5 540 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 VPS51Q9UID3 782 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 TMEM59LQ9UK28 342 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 DOCK4Q8N1I0 1966 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 LAMA5O15230 3695 aa16.18■□□□□ 0.18
CPSF1-205ENST00000531042 DOCK9Q9BZ29 2069 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 A0A0D9SEW6 157 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 F8VZ95 297 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 GOLGA8SH3BPF8 625 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 K7ERQ8 282 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 YKT6O15498 198 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 ITGAVP06756 1048 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 CTSLP07711 333 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 MAT2AP31153 395 aaKnown RBP16.17■□□□□ 0.18
CPSF1-205ENST00000531042 NOMO3P69849 1222 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 ARCQ7LC44 396 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 TFAP2DQ7Z6R9 452 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 MSANTD4Q8NCY6 345 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 OR2A12Q8NGT7 310 aa16.17■□□□□ 0.18
CPSF1-205ENST00000531042 EPS8L1Q8TE68 723 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms