RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 OBSL1O75147 1896 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ESYT3A0FGR9 886 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ILVBLA1L0T0 632 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ZSCAN5CA6NGD5 496 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 GFRA2O00451 464 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 PER2O15055 1255 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 MATN3O15232 486 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 PPFIA2O75334 1257 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 RFPL2O75678 378 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 KLKB1P03952 638 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 CYBBP04839 570 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 TPSB2P20231 275 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 POU3F3P20264 500 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 OR1E1P30953 314 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 HSPA9P38646 679 aaKnown RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 IFNAR2P48551 515 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 RENBPP51606 427 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ITGA8P53708 1063 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 IFI35P80217 286 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 MRPS25P82663 173 aaKnown RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 CYP4F8P98187 520 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 TNK2Q07912 1038 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 GPS2Q13227 327 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 HNRNPDQ14103 355 aaKnown RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 PRPSAP1Q14558 356 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 RFTN1Q14699 578 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 POLD3Q15054 466 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 TPSAB1Q15661 275 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 PARP6Q2NL67 630 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 MPPE1Q53F39 396 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 TEX44Q53QW1 395 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ANKRD20A2Q5SQ80 823 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 CFAP58Q5T655 872 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 RNASEH2BQ5TBB1 312 aaKnown RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ANKRD20A1Q5TYW2 823 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ANKRD20A3Q5VUR7 823 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ARMC3Q5W041 872 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ALS2CLQ60I27 953 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 RHBDF2Q6PJF5 856 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ZDHHC24Q6UX98 284 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ARHGEF18Q6ZSZ5 1173 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 TRMT10CQ7L0Y3 403 aaKnown RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 SPRED2Q7Z698 418 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 C14orf80Q86SX3 495 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 CROCCP2Q86T23 111 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 RBM23Q86U06 439 aaKnown RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 LGI2Q8N0V4 545 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 CNPY4Q8N129 248 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ZCCHC9Q8N567 271 aaKnown RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 NPWQ8N729 165 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 FBXO25Q8TCJ0 367 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 GDPD5Q8WTR4 605 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 LRRN4Q8WUT4 740 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 SMG7Q92540 1137 aaKnown RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 MAML1Q92585 1016 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ZNF707Q96C28 371 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 FAM118BQ9BPY3 351 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 SLC46A2Q9BY10 475 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ATP13A2Q9NQ11 1180 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 TDP1Q9NUW8 608 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 OBP2AQ9NY56 170 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 GDE1Q9NZC3 331 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ZNF212Q9UDV6 495 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 XPO7Q9UIA9 1087 aaKnown RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 TBC1D30Q9Y2I9 924 aa10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ZFP37Q9Y6Q3 630 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-228ENST00000531007 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-228ENST00000531007 RNF103O00237 685 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 DFFAO00273 331 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 LEFTY2O00292 366 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 GREM1O60565 184 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 MOSPD3O75425 235 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 MLNP12872 115 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 GDF10P55107 478 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 IL10RBQ08334 325 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 ZNF177Q13360 481 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-228ENST00000531007 SEMA5AQ13591 1074 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 SLC12A1Q13621 1099 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 RNF43Q68DV7 783 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 CENPUQ71F23 418 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 GRASPQ7Z6J2 395 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-228ENST00000531007 ADGRD2Q7Z7M1 963 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 GPR149Q86SP6 731 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 ARHGAP12Q8IWW6 846 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 BBS5Q8N3I7 341 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 CELF5Q8N6W0 485 aaKnown RBP10.08□□□□□ -0.8
CTNND1-228ENST00000531007 NAT8LQ8N9F0 302 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 MCUQ8NE86 351 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 IGSF8Q969P0 613 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 LRRC39Q96DD0 335 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 TMA16Q96EY4 203 aaKnown RBP10.08□□□□□ -0.8
CTNND1-228ENST00000531007 TTC25Q96NG3 672 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 CDK15Q96Q40 435 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 CYP2S1Q96SQ9 504 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 LGMNQ99538 433 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 SLC39A8Q9C0K1 460 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 ADAM7Q9H2U9 754 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 ZNF576Q9H609 170 aa10.08□□□□□ -0.8
CTNND1-228ENST00000531007 CERS4Q9HA82 394 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms