RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 ROPN1Q9HAT0 212 aaPredicted RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 ZFP14Q9HCL3 533 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 CLDND1Q9NY35 253 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 UBP1Q9NZI7 540 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 CALCOCO1Q9P1Z2 691 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 C2orf78A6NCI8 922 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 CDH16O75309 829 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 TTC4O95801 387 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 NFKB1P19838 968 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 PSMB4P28070 264 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 HSD17B3P37058 310 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 MAPK8P45983 427 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 NPY2RP49146 381 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 NUMBP49757 651 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 SULT2A1Q06520 285 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 ZNF33AQ06730 810 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 MTM1Q13496 603 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 RAB6CQ53S08 254 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 SETD3Q86TU7 594 aaPredicted RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 FBXO36Q8NEA4 188 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 CSGALNACT1Q8TDX6 532 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 AENQ8WTP8 325 aaKnown RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 RAB6CQ9H0N0 254 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 TMEM30AQ9NV96 361 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 PPARGC1AQ9UBK2 798 aaKnown RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 HCFC2Q9Y5Z7 792 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 NEDD8-MDP1E9PL57 170 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 STC2O76061 302 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 IGSF6O95976 241 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 FYNP06241 537 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 HOXB8P17481 243 aaPredicted RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 RPS24P62847 133 aaKnown RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 IL10RBQ08334 325 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 PPIDQ08752 370 aaKnown RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 LBRQ14739 615 aaKnown RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 OASLQ15646 514 aaKnown RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 HHATQ5VTY9 493 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 CMTM8Q8IZV2 173 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 NETO2Q8NC67 525 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 FICDQ9BVA6 458 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 SLC39A8Q9C0K1 460 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 CDC42EP4Q9H3Q1 356 aaKnown RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 TMEM248Q9NWD8 314 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 DUS2Q9NX74 493 aaKnown RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 PLK2Q9NYY3 685 aa7.56□□□□□ -1.2
BDNF-214ENST00000530786 NOVA2Q9UNW9 492 aaKnown RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 FNDC3AQ9Y2H6 1198 aaKnown RBP7.56□□□□□ -1.2
BDNF-214ENST00000530786 E2F8A0AVK6 867 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 ILVBLA1L0T0 632 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 NEMP1O14524 444 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 CLASP2O75122 1294 aaKnown RBP7.55□□□□□ -1.2
BDNF-214ENST00000530786 RNF40O75150 1001 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 GABBR2O75899 941 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 HOXA9P31269 272 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 CHST9Q7L1S5 443 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 TMC3Q7Z5M5 1100 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 SDCCAG8Q86SQ7 713 aaPredicted RBP7.55□□□□□ -1.2
BDNF-214ENST00000530786 PRUNE1Q86TP1 453 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 GANCQ8TET4 914 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 PPM1EQ8WY54 764 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 AZIN2Q96A70 460 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 E2F7Q96AV8 911 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 OTUB2Q96DC9 234 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 VPS39Q96JC1 886 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 CRISPLD1Q9H336 500 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 VPS45Q9NRW7 570 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 FAM50BQ9Y247 325 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 RPS6KL1Q9Y6S9 549 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 GOLGA6L7A0A1B0GV03 622 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 FAM72CH0Y354 149 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 LEFTY2O00292 366 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 UGP2Q16851 508 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 SPDYCQ5MJ68 293 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 MFSD4BQ5TF39 518 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 FAM72AQ5TYM5 149 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 FAM72DQ6L9T8 149 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 FAM72BQ86X60 149 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 CIR1Q86X95 450 aaPredicted RBP7.55□□□□□ -1.2
BDNF-214ENST00000530786 CALML6Q8TD86 181 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 LRRN4Q8WUT4 740 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 ZNF669Q96BR6 464 aaPredicted RBP7.55□□□□□ -1.2
BDNF-214ENST00000530786 HMCESQ96FZ2 354 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 APOL2Q9BQE5 337 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 NSRP1Q9H0G5 558 aaKnown RBP7.55□□□□□ -1.2
BDNF-214ENST00000530786 GLOD4Q9HC38 313 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 TLK1Q9UKI8 766 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 AGO1Q9UL18 857 aaKnown RBP7.55□□□□□ -1.2
BDNF-214ENST00000530786 F8W8V4 182 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 H0YGN5 161 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 SNRPD1P62314 119 aaKnown RBP7.55□□□□□ -1.2
BDNF-214ENST00000530786 GAD2Q05329 585 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 CCDC15Q0P6D6 951 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 GALNT2Q10471 571 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 CHRDL2Q6WN34 429 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 ARID3BQ8IVW6 561 aaPredicted RBP7.55□□□□□ -1.2
BDNF-214ENST00000530786 CPA6Q8N4T0 437 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 C12orf76Q8N812 135 aaPredicted RBP7.55□□□□□ -1.2
BDNF-214ENST00000530786 GSDMBQ8TAX9 411 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 SEMA4AQ9H3S1 761 aa7.55□□□□□ -1.2
BDNF-214ENST00000530786 WDR70Q9NW82 654 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms