RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 TOR4AQ9NXH8 423 aa21.46■■□□□ 1.03
SMPD1-204ENST00000530395 OR51B4Q9Y5P0 310 aa21.46■■□□□ 1.03
SMPD1-204ENST00000530395 DOCK4Q8N1I0 1966 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 LAMA5O15230 3695 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 C10orf142B7Z368 130 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 MCF2LO15068 1137 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 YKT6O15498 198 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 UCHL3P15374 230 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 NUDT1P36639 197 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 SLC25A52Q3SY17 297 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 TCP11X2Q5H9J9 407 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 Q6ZVU0 165 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 XYLT1Q86Y38 959 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 NT5C3BQ969T7 300 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 FAM131CQ96AQ9 280 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 TBCBQ99426 244 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 NAA15Q9BXJ9 866 aaKnown RBP21.45■■□□□ 1.02
SMPD1-204ENST00000530395 FTSJ1Q9UET6 329 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 FARP1Q9Y4F1 1045 aaPredicted RBP21.45■■□□□ 1.02
SMPD1-204ENST00000530395 COL5A1P20908 1838 aaPredicted RBP21.45■■□□□ 1.02
SMPD1-204ENST00000530395 ZFYVE26Q68DK2 2539 aa21.45■■□□□ 1.02
SMPD1-204ENST00000530395 LATO43561 262 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 PLRG1O43660 514 aaKnown RBP21.44■■□□□ 1.02
SMPD1-204ENST00000530395 CNTN5O94779 1100 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 DKK1O94907 266 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 WNT1P04628 370 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 TFE3P19532 575 aaPredicted RBP21.44■■□□□ 1.02
SMPD1-204ENST00000530395 PPP2CBP62714 309 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 PPP2CAP67775 309 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 SCAPQ12770 1279 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 C6orf118Q5T5N4 469 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 NAPEPLDQ6IQ20 393 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 TMPRSS7Q7RTY8 843 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 SETD3Q86TU7 594 aaPredicted RBP21.44■■□□□ 1.02
SMPD1-204ENST00000530395 GALNT15Q8N3T1 639 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 PIP4K2CQ8TBX8 421 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 STK33Q9BYT3 514 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 SAMSN1Q9NSI8 373 aaKnown RBP21.44■■□□□ 1.02
SMPD1-204ENST00000530395 SARDHQ9UL12 918 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 PPM1HQ9ULR3 514 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 HS3ST2Q9Y278 367 aa21.44■■□□□ 1.02
SMPD1-204ENST00000530395 A0A1W2PR77 199 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 F8VZ95 297 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 GOLGA8SH3BPF8 625 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 BNIP3LO60238 219 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 RTN2O75298 545 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 ITGAVP06756 1048 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 TPM2P07951 284 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 SRCP12931 536 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 ARRB1P49407 418 aaPredicted RBP21.43■■□□□ 1.02
SMPD1-204ENST00000530395 METAP1P53582 386 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 CNTN1Q12860 1018 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 ALFQ53S48 1182 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 NOP9Q86U38 636 aaKnown RBP21.43■■□□□ 1.02
SMPD1-204ENST00000530395 PROSER1Q86XN7 944 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 OXR1Q8N573 874 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 ATP11CQ8NB49 1132 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 C1orf74Q96LT6 269 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 ANLNQ9NQW6 1124 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 DMTF1Q9Y222 760 aa21.43■■□□□ 1.02
SMPD1-204ENST00000530395 ITPR1Q14643 2758 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 TLR4O00206 839 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 PLK4O00444 970 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 MAGEC1O60732 1142 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 FLT3P36888 993 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 CCDC15Q0P6D6 951 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 POM121L1PQ3SYA9 428 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 SETMARQ53H47 684 aaPredicted RBP21.42■■□□□ 1.02
SMPD1-204ENST00000530395 AGBL4Q5VU57 503 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 TRIM69Q86WT6 500 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 ZNF677Q86XU0 584 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 ZNF683Q8IZ20 524 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 DCAF4L2Q8NA75 395 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 EPS8L1Q8TE68 723 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 CCDC86Q9H6F5 360 aaKnown RBP21.42■■□□□ 1.02
SMPD1-204ENST00000530395 TAB2Q9NYJ8 693 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 VPS51Q9UID3 782 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 SNX10Q9Y5X0 201 aa21.42■■□□□ 1.02
SMPD1-204ENST00000530395 FAM170AA1A519 330 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 DRGXA6NNA5 263 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 E9PAM4 449 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 I6L893 689 aaPredicted RBP21.41■■□□□ 1.02
SMPD1-204ENST00000530395 WNT9AO14904 365 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 SNAP91O60641 907 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 OR1E1P30953 314 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 MAT2AP31153 395 aaKnown RBP21.41■■□□□ 1.02
SMPD1-204ENST00000530395 CLCN6P51797 869 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 NXPH1P58417 271 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 NOMO3P69849 1222 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 CCDC157Q569K6 752 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 PRAMEF14Q5SWL7 426 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 NAA35Q5VZE5 725 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 TFAP2DQ7Z6R9 452 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 GATAD2AQ86YP4 633 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 MFSD2AQ8NA29 543 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 CPA5Q8WXQ8 436 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 HAPLN3Q96S86 360 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 PSMB7Q99436 277 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 ERVMER34-1Q9H9K5 563 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 PREBQ9HCU5 417 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms