RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 TRIP4Q15650 581 aaPredicted RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 ANO4Q32M45 955 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 BBS9Q3SYG4 887 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 TNFAIP8L3Q5GJ75 292 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 ANKRD20A2Q5SQ80 823 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 ANKRD20A1Q5TYW2 823 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 ANKRD20A3Q5VUR7 823 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 ARMC3Q5W041 872 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 NUGGCQ68CJ6 796 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 DGLUCYQ7Z3D6 616 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 SCD5Q86SK9 330 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 PRUNE1Q86TP1 453 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 CCDC13Q8IYE1 715 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 KIAA2013Q8IYS2 634 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 PYROXD2Q8N2H3 581 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 EFHBQ8N7U6 833 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 KLHL23Q8NBE8 558 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 KREMEN2Q8NCW0 462 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 STKLD1Q8NE28 680 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 ADAM32Q8TC27 787 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 SPPL3Q8TCT6 385 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 CCDC97Q96F63 343 aaPredicted RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 P2RY11Q96G91 374 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 PGLYRP2Q96PD5 576 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 CYTH2Q99418 400 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 NAT9Q9BTE0 207 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 TTLL2Q9BWV7 592 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 LMAN2LQ9H0V9 348 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 CWH43Q9H720 699 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 ETNK1Q9HBU6 452 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 DNAJC17Q9NVM6 304 aaKnown RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 SPG21Q9NZD8 308 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 GMIPQ9P107 970 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 CALCOCO1Q9P1Z2 691 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 PSMC3IPQ9P2W1 217 aaPredicted RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 PPARGC1AQ9UBK2 798 aaKnown RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 UXTQ9UBK9 157 aaPredicted RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 HBS1LQ9Y450 684 aaKnown RBP8.4□□□□□ -1.06
CMTM1-214ENST00000530141 IKBKGQ9Y6K9 419 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 DNAH14Q0VDD8 3507 aa8.4□□□□□ -1.06
CMTM1-214ENST00000530141 FNDC1Q4ZHG4 1894 aaPredicted RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 SMIM23A6NLE4 172 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 SLC38A8A6NNN8 435 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 KCNU1A8MYU2 1149 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 RNF103O00237 685 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 PI15O43692 258 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 NEBLO76041 1014 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 TMEM63AO94886 807 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 LRIG2O94898 1065 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 EFEMP2O95967 443 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 APRTP07741 180 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 SRGAP2BP0DMP2 458 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 CCNCP24863 283 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 ELF1P32519 619 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 GARSP41250 739 aaKnown RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 MMP16P51512 607 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 GYS2P54840 703 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 DSG1Q02413 1049 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 SLC10A2Q12908 348 aaPredicted RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 NAB1Q13506 487 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 LAPTM4AQ15012 233 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 TAF12Q16514 161 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 DDR2Q16832 855 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 RTP2Q5QGT7 225 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 LGSNQ5TDP6 509 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 ANKRD22Q5VYY1 191 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 CWF19L1Q69YN2 538 aaKnown RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 RWDD4Q6NW29 188 aaKnown RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 LRRC8BQ6P9F7 803 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 ZNF449Q6P9G9 518 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 KLHDC10Q6PID8 442 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 C3orf62Q6ZUJ4 267 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 CYS1Q717R9 158 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 DDX53Q86TM3 631 aaKnown RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 RNF168Q8IYW5 571 aaPredicted RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 SH2D3CQ8N5H7 860 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 COLGALT1Q8NBJ5 622 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 ATAD1Q8NBU5 361 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 FBXO36Q8NEA4 188 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 UHMK1Q8TAS1 419 aaKnown RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 CCDC110Q8TBZ0 833 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 EPS8L3Q8TE67 593 aaKnown RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 NSMCE1Q8WV22 266 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 SUSD6Q92537 303 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 FATE1Q969F0 183 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 ZNF689Q96CS4 500 aaPredicted RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 SLC39A13Q96H72 371 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 BTN2A3PQ96KV6 586 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 FCRL2Q96LA5 508 aaPredicted RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 TSGA13Q96PP4 275 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 C10orf88Q9H8K7 445 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 LRRC4CQ9HCJ2 640 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 NKIRAS1Q9NYS0 192 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 KLHL8Q9P2G9 620 aaPredicted RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 SMG5Q9UPR3 1016 aaKnown RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 CDY1Q9Y6F8 540 aa8.39□□□□□ -1.07
CMTM1-214ENST00000530141 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.39□□□□□ -1.07
CMTM1-214ENST00000530141 EPG5Q9HCE0 2579 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms