RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 LGI2Q8N0V4 545 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 MAPK15Q8TD08 544 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 SNRNP27Q8WVK2 155 aaKnown RBP9.27□□□□□ -0.93
VPS11-203ENST00000529545 FOXD4L4Q8WXT5 416 aaPredicted RBP9.27□□□□□ -0.93
VPS11-203ENST00000529545 GRAMD1AQ96CP6 724 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 DUSP23Q9BVJ7 150 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 FAM117AQ9C073 453 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 SEMA4CQ9C0C4 833 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 NUCKS1Q9H1E3 243 aaKnown RBP9.27□□□□□ -0.93
VPS11-203ENST00000529545 OSBPL2Q9H1P3 480 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 PREBQ9HCU5 417 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 NLGN3Q9NZ94 848 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 ARHGAP20Q9P2F6 1191 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 TJP2Q9UDY2 1190 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 SLC25A13Q9UJS0 675 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 CFAP45Q9UL16 551 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 MAPK8IP1Q9UQF2 711 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 TLR6Q9Y2C9 796 aa9.27□□□□□ -0.93
VPS11-203ENST00000529545 MGAQ8IWI9 3026 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 A0A1B0GVM2 712 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 CYSRT1A8MQ03 144 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 F5H5T6 163 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 PYCARD-AS1I3L0S3 204 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 O00370 1275 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 PIK3R2O00459 728 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 CETN3O15182 167 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 SLC31A1O15431 190 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 SART1O43290 800 aaKnown RBP9.26□□□□□ -0.93
VPS11-203ENST00000529545 TBXAS1P24557 533 aaPredicted RBP9.26□□□□□ -0.93
VPS11-203ENST00000529545 AKT2P31751 481 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 STK19P49842 368 aaPredicted RBP9.26□□□□□ -0.93
VPS11-203ENST00000529545 CSRP3P50461 194 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 CNTN1Q12860 1018 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 NNTQ13423 1086 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 STILQ15468 1287 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 C3orf38Q5JPI3 329 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 NEK5Q6P3R8 708 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 LCLAT1Q6UWP7 414 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 CCDC81Q6ZN84 652 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 APCDD1Q8J025 514 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 GUF1Q8N442 669 aaKnown RBP9.26□□□□□ -0.93
VPS11-203ENST00000529545 DQX1Q8TE96 717 aaKnown RBP9.26□□□□□ -0.93
VPS11-203ENST00000529545 SLC35F5Q8WV83 523 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 TTC9Q92623 222 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 RNF34Q969K3 372 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 FAM149B1Q96BN6 582 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 FCRL2Q96LA5 508 aaPredicted RBP9.26□□□□□ -0.93
VPS11-203ENST00000529545 HSFY1Q96LI6 401 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 APOLD1Q96LR9 279 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 MYOCQ99972 504 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 TRIM62Q9BVG3 475 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 CALN1Q9BXU9 219 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 MIS12Q9H081 205 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 ASCL3Q9NQ33 180 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 UCKL1Q9NWZ5 548 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 NCKIPSDQ9NZQ3 722 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 SLC12A6Q9UHW9 1150 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 CA5BQ9Y2D0 317 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 GTF3C3Q9Y5Q9 886 aa9.26□□□□□ -0.93
VPS11-203ENST00000529545 TDRD6O60522 2096 aaKnown RBP9.25□□□□□ -0.93
VPS11-203ENST00000529545 K7ENP7 123 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 M0QYV0 167 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 ALOX15BO15296 676 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 PIAS2O75928 621 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 RHOBTB3O94955 611 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 PAEPP09466 180 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 VAV1P15498 845 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 PDGFRAP16234 1089 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 TACR2P21452 398 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 SLC19A1P41440 591 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 HNRNPKP61978 463 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS11-203ENST00000529545 ISXQ2M1V0 245 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 EDRF1Q3B7T1 1238 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 DCAF17Q5H9S7 520 aaPredicted RBP9.25□□□□□ -0.93
VPS11-203ENST00000529545 TTC39BQ5VTQ0 682 aaPredicted RBP9.25□□□□□ -0.93
VPS11-203ENST00000529545 AGBL4Q5VU57 503 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 RAP1GAP2Q684P5 730 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 PMF1Q6P1K2 205 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 INO80CQ6PI98 192 aaPredicted RBP9.25□□□□□ -0.93
VPS11-203ENST00000529545 IGF2-ASQ6U949 168 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 TMEM270Q6UE05 265 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 DCP2Q8IU60 420 aaKnown RBP9.25□□□□□ -0.93
VPS11-203ENST00000529545 ARL14Q8N4G2 192 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 TMEM145Q8NBT3 493 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 TPCN2Q8NHX9 752 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 FAM174AQ8TBP5 190 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 IFI44Q8TCB0 444 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 ERCC4Q92889 916 aaPredicted RBP9.25□□□□□ -0.93
VPS11-203ENST00000529545 FAM131CQ96AQ9 280 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 THAP11Q96EK4 314 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 MYEOVQ96EZ4 313 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 IFT43Q96FT9 208 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 EEF2KMTQ96G04 330 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 SLC39A13Q96H72 371 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 BTN2A3PQ96KV6 586 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 CCDC114Q96M63 670 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 DYRK4Q9NR20 520 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 DNAJC28Q9NX36 388 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 SARDHQ9UL12 918 aa9.25□□□□□ -0.93
VPS11-203ENST00000529545 SATB2Q9UPW6 733 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms