RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 NPY6RQ99463 290 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 SMAD5Q99717 465 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 C11orf70Q9BRQ4 267 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 ISCUQ9H1K1 167 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 TBC1D17Q9HA65 648 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 FBRSL1Q9HCM7 1045 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 LTB4R2Q9NPC1 389 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 SPHK2Q9NRA0 654 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 TAS2R14Q9NYV8 317 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 ARHGAP20Q9P2F6 1191 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 TAGLN3Q9UI15 199 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 STOML2Q9UJZ1 356 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 MRPS17Q9Y2R5 130 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 SIT1Q9Y3P8 196 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 MTF2Q9Y483 593 aaPredicted RBP6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 TECTAO75443 2155 aa6.48□□□□□ -1.37
ATPAF1-209ENST00000529214 A0A0A0MRY4 1105 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 LINC00854A0A1B0GVQ3 168 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 TCRBV5S1A1TA0A578 114 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 SERTM1A2A2V5 107 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 KCNU1A8MYU2 1149 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 GOLGA8SH3BPF8 625 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 M0QYT0 321 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ERVH48-1M5A8F1 160 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 GFRA2O00451 464 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 NCAM2O15394 837 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ZSCAN9O15535 394 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 IRAK2O43187 625 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ACSL4O60488 711 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 RTN2O75298 545 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 DAB1O75553 588 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ENDOD1O94919 500 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 GJB6O95452 261 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 LATS1O95835 1130 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ADH1CP00326 375 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 F9P00740 461 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 FTLP02792 175 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 CYP17A1P05093 508 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 PLEKP08567 350 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 TPM1P09493 284 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 CHRNB1P11230 501 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 KRT3P12035 628 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 TARSP26639 723 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 RFC1P35251 1148 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 OPRD1P41143 372 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 GIPRP48546 466 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 MRE11P49959 708 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ADKP55263 362 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 UBXN2BQ14CS0 331 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 MLC1Q15049 377 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ASTE1Q2TB18 679 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 SLC25A52Q3SY17 297 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 TDRD12Q587J7 1177 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 TMEM196Q5HYL7 178 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ADGRF1Q5T601 910 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 FAM102AQ5T9C2 384 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 NUGGCQ68CJ6 796 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 TRNP1Q6NT89 227 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ZNF449Q6P9G9 518 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 NEK10Q6ZWH5 1172 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 TMC6Q7Z403 805 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 BNIPLQ7Z465 357 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 PHLDB2Q86SQ0 1253 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 TAC4Q86UU9 113 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 SLITRK4Q8IW52 837 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 FAM217AQ8IXS0 508 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 PEX5LQ8IYB4 626 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 CPXM2Q8N436 756 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 AFAP1L2Q8N4X5 818 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 FAM160A2Q8N612 972 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 TEX19Q8NA77 164 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 C3orf20Q8ND61 904 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 PJA1Q8NG27 643 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 OR6P1Q8NGX9 317 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 CLDN23Q96B33 292 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 SH3GL1Q99961 368 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 P2RY13Q9BPV8 354 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 FOXQ1Q9C009 403 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ABCG4Q9H172 646 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 SUV39H2Q9H5I1 410 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 LMAN1LQ9HAT1 526 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ZNF304Q9HCX3 659 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 MARK1Q9P0L2 795 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 DLGAP2Q9P1A6 1054 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 FBXO10Q9UK96 956 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 A0A087X0T9 212 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 SSU72P8A0A1W2PR75 194 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 C2CD4BA6NLJ0 364 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 AKR1B15C9JRZ8 316 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 HOXC11O43248 304 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 MFAP3LO75121 409 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 DCNP07585 359 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 FAM228BP0C875 321 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 SLC2A3P11169 496 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 ADH5P11766 374 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 TYRP14679 529 aa6.47□□□□□ -1.37
ATPAF1-209ENST00000529214 PDGFRAP16234 1089 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms