RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 SLC31A1O15431 190 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 KLK10O43240 276 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 OPA1O60313 960 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 ZNF202O95125 648 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 SMC2O95347 1197 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 TRUB2O95900 331 aaKnown RBP11.88□□□□□ -0.51
CMTM1-211ENST00000528484 VAV1P15498 845 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 HNRNPA2B1P22626 353 aaKnown RBP11.88□□□□□ -0.51
CMTM1-211ENST00000528484 RBMS1P29558 406 aaKnown RBP11.88□□□□□ -0.51
CMTM1-211ENST00000528484 CCR1P32246 355 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 LSSP48449 732 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 FMO5P49326 533 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
CMTM1-211ENST00000528484 HNRNPKP61978 463 aaKnown RBP eCLIP11.88□□□□□ -0.51
CMTM1-211ENST00000528484 CDK17Q00537 523 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 ZNF177Q13360 481 aaPredicted RBP11.88□□□□□ -0.51
CMTM1-211ENST00000528484 CCDC40Q4G0X9 1142 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 AGBL4Q5VU57 503 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 DCP2Q8IU60 420 aaKnown RBP11.88□□□□□ -0.51
CMTM1-211ENST00000528484 UBR7Q8N806 425 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 MAPK15Q8TD08 544 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 FAM131CQ96AQ9 280 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 MYEOVQ96EZ4 313 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 IFT43Q96FT9 208 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 MYOCQ99972 504 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 SCAND2PQ9GZW5 306 aaPredicted RBP11.88□□□□□ -0.51
CMTM1-211ENST00000528484 NLGN3Q9NZ94 848 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 HOOK1Q9UJC3 728 aaKnown RBP11.88□□□□□ -0.51
CMTM1-211ENST00000528484 VPS28Q9UK41 221 aa11.88□□□□□ -0.51
CMTM1-211ENST00000528484 SYNJ2BP-COX16A0A087WUM0 186 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 A0A1W2PQ27 194 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 A0A1W2PQ64 194 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 A0A1W2PQU0 124 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 KPNA3O00505 521 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-211ENST00000528484 ATP9BO43861 1147 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 CSO75390 466 aaKnown RBP11.87□□□□□ -0.51
CMTM1-211ENST00000528484 DXOO77932 396 aaKnown RBP11.87□□□□□ -0.51
CMTM1-211ENST00000528484 PCDH8O95206 1070 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 FYNP06241 537 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 KRT5P13647 590 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 PRCPP42785 496 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 RECQLP46063 649 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-211ENST00000528484 NUMBP49757 651 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 PLK1P53350 603 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 YWHAZP63104 245 aaKnown RBP11.87□□□□□ -0.51
CMTM1-211ENST00000528484 KRT83P78385 493 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 VAC14Q08AM6 782 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 DLG2Q15700 870 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 ZNF658Q5TYW1 1059 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-211ENST00000528484 Q6ZVU0 165 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 CIR1Q86X95 450 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-211ENST00000528484 SLC25A45Q8N413 288 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 FRS2Q8WU20 508 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 SLC35C1Q96A29 364 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 GRAMD1AQ96CP6 724 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 PPP1R16AQ96I34 528 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 HIC2Q96JB3 615 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 SRRTQ9BXP5 876 aaKnown RBP11.87□□□□□ -0.51
CMTM1-211ENST00000528484 MUC3BQ9H195 1237 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 THAP9Q9H5L6 903 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 CPNE5Q9HCH3 593 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 DDIT4Q9NX09 232 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 COX16Q9P0S2 106 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 XPO7Q9UIA9 1087 aaKnown RBP11.87□□□□□ -0.51
CMTM1-211ENST00000528484 SARDHQ9UL12 918 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 PPM1HQ9ULR3 514 aa11.87□□□□□ -0.51
CMTM1-211ENST00000528484 MAST4O15021 2626 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 A6NNZ2 444 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 PSMA7O14818 248 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 PMM2O15305 246 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 P4HA2O15460 535 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 CLDN11O75508 207 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 PIAS2O75928 621 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 PRNPP04156 253 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 PRLRP16471 622 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 METAP1P53582 386 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 GCNT1Q02742 428 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 KCNC4Q03721 635 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 PKP1Q13835 747 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 MEA1Q16626 185 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 COBLL1Q53SF7 1204 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 CDCP2Q5VXM1 449 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 SYPL2Q5VXT5 272 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 ANKRD40Q6AI12 368 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 PTAR1Q7Z6K3 402 aaPredicted RBP11.86□□□□□ -0.51
CMTM1-211ENST00000528484 HORMAD1Q86X24 394 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 ATP11CQ8NB49 1132 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 TMEM145Q8NBT3 493 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 TPCN2Q8NHX9 752 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 STK32AQ8WU08 396 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 KLK6Q92876 244 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 GLMNQ92990 594 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 APOLD1Q96LR9 279 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 GSDMAQ96QA5 445 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 FEM1AQ9BSK4 669 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 C2orf49Q9BVC5 232 aaPredicted RBP11.86□□□□□ -0.51
CMTM1-211ENST00000528484 OSBPL2Q9H1P3 480 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 CLMPQ9H6B4 373 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 DNAJC28Q9NX36 388 aa11.86□□□□□ -0.51
CMTM1-211ENST00000528484 IPO11Q9UI26 975 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms