RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 USH1CQ9Y6N9 552 aa15.07■□□□□ 0
ECHDC1-220ENST00000528402 MICAL3Q7RTP6 2002 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 TET1Q8NFU7 2136 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 EFCAB14O75071 495 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 DCTN3O75935 186 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 MOCS2O96007 188 aaPredicted RBP15.06■□□□□ 0
ECHDC1-220ENST00000528402 PPP3CCP48454 512 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 POLD2P49005 469 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 MAPKAPK2P49137 400 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 GATMP50440 423 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 PAPOLAP51003 745 aaKnown RBP15.06■□□□□ 0
ECHDC1-220ENST00000528402 CSE1LP55060 971 aaKnown RBP15.06■□□□□ 0
ECHDC1-220ENST00000528402 ILF2Q12905 390 aaKnown RBP15.06■□□□□ 0
ECHDC1-220ENST00000528402 DUSP4Q13115 394 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 SPDYAQ5MJ70 313 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 C10orf120Q5SQS8 335 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 C14orf80Q86SX3 495 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 RASSF3Q86WH2 238 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 RNF168Q8IYW5 571 aaPredicted RBP15.06■□□□□ 0
ECHDC1-220ENST00000528402 CNTD1Q8N815 330 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 GABPB2Q8TAK5 448 aaPredicted RBP15.06■□□□□ 0
ECHDC1-220ENST00000528402 AZIN2Q96A70 460 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 TBL1YQ9BQ87 522 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 CRISPLD2Q9H0B8 497 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 RXFP1Q9HBX9 757 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 VPS45Q9NRW7 570 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 RBM22Q9NW64 420 aaKnown RBP eCLIP15.06■□□□□ 07e-6■■■■□ 24.6
ECHDC1-220ENST00000528402 SLC17A7Q9P2U7 560 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 STK39Q9UEW8 545 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 AFF4Q9UHB7 1163 aaKnown RBP15.06■□□□□ 0
ECHDC1-220ENST00000528402 SLC27A5Q9Y2P5 690 aa15.06■□□□□ 0
ECHDC1-220ENST00000528402 ABHD14A-ACY1A0A1B0GW23 586 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 SLC12A8A0AV02 714 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 PIAS1O75925 651 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 DNAJC8O75937 253 aaPredicted RBP15.05■□□□□ -0
ECHDC1-220ENST00000528402 ATP5HO75947 161 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 NEFHP12036 1026 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 ATP5C1P36542 298 aaKnown RBP15.05■□□□□ -0
ECHDC1-220ENST00000528402 SERPINB4P48594 390 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 CCL23P55773 120 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 SETDB1Q15047 1291 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 ZKSCAN8Q15776 578 aaPredicted RBP15.05■□□□□ -0
ECHDC1-220ENST00000528402 PSMD5Q16401 504 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 PARP15Q460N3 678 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 C5orf22Q49AR2 442 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 MROH9Q5TGP6 573 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 RASIP1Q5U651 963 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 PDPK2PQ6A1A2 396 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 KIAA1841Q6NSI8 718 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 C10orf67Q8IYJ2 551 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 GPR65Q8IYL9 337 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 NDUFAF2Q8N183 169 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 STKLD1Q8NE28 680 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 SCLYQ96I15 445 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 IGSF21Q96ID5 467 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 KLF6Q99612 283 aaPredicted RBP15.05■□□□□ -0
ECHDC1-220ENST00000528402 SLC25A51Q9H1U9 297 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 DNMT3LQ9UJW3 386 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 NUDT5Q9UKK9 219 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 CDY1Q9Y6F8 540 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 SCN5AQ14524 2016 aa15.05■□□□□ -0
ECHDC1-220ENST00000528402 ZCWPW2A0A1B0GU75 182 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 F5H423 210 aaPredicted RBP15.04■□□□□ -0
ECHDC1-220ENST00000528402 TIMM44O43615 452 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 GLRA3O75311 464 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 DNAJB1P25685 340 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 PDE1BQ01064 536 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 TLE2Q04725 743 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 CDK18Q07002 472 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 IL10RBQ08334 325 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 TCTN1Q2MV58 587 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 PKN3Q6P5Z2 889 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 MICALL1Q8N3F8 863 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 CCDC63Q8NA47 563 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 ISL2Q96A47 359 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 ZNF669Q96BR6 464 aaPredicted RBP15.04■□□□□ -0
ECHDC1-220ENST00000528402 FAM111AQ96PZ2 611 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 PRKD2Q9BZL6 878 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 CWH43Q9H720 699 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 ARNT2Q9HBZ2 717 aa15.04■□□□□ -0
ECHDC1-220ENST00000528402 HMX2A2RU54 273 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 NT5C1B-RDH14C9J2C7 533 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 H0YHG0 523 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 TLR5O60602 858 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 VNN2O95498 520 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 SOD2P04179 222 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 MPOP05164 745 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 ITGA2BP08514 1039 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 PAMP19021 973 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 SKIV2L2P42285 1042 aaKnown RBP15.03■□□□□ -0
ECHDC1-220ENST00000528402 SCTRP47872 440 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 LIG3P49916 1009 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 CRADDP78560 199 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 LAMB3Q13751 1172 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 BTG3Q14201 252 aaPredicted RBP15.03■□□□□ -0
ECHDC1-220ENST00000528402 UGP2Q16851 508 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 GALNTL6Q49A17 601 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 MARC1Q5VT66 337 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 CGB2Q6NT52 195 aa15.03■□□□□ -0
ECHDC1-220ENST00000528402 FBXL22Q6P050 247 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms