RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 LATS1O95835 1130 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 GPR153Q6NV75 609 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 CIR1Q86X95 450 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-203ENST00000527275 CDKL3Q8IVW4 592 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-203ENST00000527275 CCDC33Q8N5R6 958 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 NPWQ8N729 165 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 ST13P5Q8NFI4 369 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-203ENST00000527275 LRRN4Q8WUT4 740 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 RIPOR3Q96MK2 946 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 PRICKLE1Q96MT3 831 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-203ENST00000527275 ASB16Q96NS5 453 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 ZYG11BQ9C0D3 744 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 CATSPERBQ9H7T0 1116 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 NDFIP2Q9NV92 336 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 PAK5Q9P286 719 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 E2F8A0AVK6 867 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 DRGXA6NNA5 263 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 FGF10O15520 208 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-203ENST00000527275 VIPR2P41587 438 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 RPS24P62847 133 aaKnown RBP19.23■□□□□ 0.67
SMPD1-203ENST00000527275 ZNF77Q15935 545 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 HIF1AQ16665 826 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 LONRF1Q17RB8 773 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 TFAP2DQ7Z6R9 452 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 TP53INP2Q8IXH6 220 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 DEFB123Q8N688 67 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 TTC25Q96NG3 672 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 GUCD1Q96NT3 240 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 LRRC3BQ96PB8 259 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 POMKQ9H5K3 350 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 DTLQ9NZJ0 730 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 CDH7Q9ULB5 785 aa19.23■□□□□ 0.67
SMPD1-203ENST00000527275 ZFP37Q9Y6Q3 630 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-203ENST00000527275 TCRBV7S3A2A0A539 114 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 MFSD11O43934 449 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 TSPAN3O60637 253 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 SGSHP51688 502 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 ARL4CP56559 192 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 PPP2R2AP63151 447 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 GNGT1P63211 74 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 GAD2Q05329 585 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 PDIA2Q13087 525 aaKnown RBP19.22■□□□□ 0.67
SMPD1-203ENST00000527275 SLC45A4Q5BKX6 768 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 HABP4Q5JVS0 413 aaKnown RBP19.22■□□□□ 0.67
SMPD1-203ENST00000527275 HP1BP3Q5SSJ5 553 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-203ENST00000527275 TTC19Q6DKK2 380 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-203ENST00000527275 BZW1Q7L1Q6 419 aaKnown RBP19.22■□□□□ 0.67
SMPD1-203ENST00000527275 NLRP14Q86W24 1093 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 ZBED8Q8IZ13 594 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 CELF5Q8N6W0 485 aaKnown RBP19.22■□□□□ 0.67
SMPD1-203ENST00000527275 SMARCD2Q92925 531 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 ZNF510Q9Y2H8 683 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 AGTP01019 485 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 WEE1P30291 646 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 IFI35P80217 286 aaPredicted RBP19.22■□□□□ 0.67
SMPD1-203ENST00000527275 FASTKD3Q14CZ7 662 aaKnown RBP19.22■□□□□ 0.67
SMPD1-203ENST00000527275 PAFAH1B3Q15102 231 aaKnown RBP19.22■□□□□ 0.67
SMPD1-203ENST00000527275 C5orf22Q49AR2 442 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 FAM217AQ8IXS0 508 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 RTL3Q8N8U3 475 aaKnown RBP19.22■□□□□ 0.67
SMPD1-203ENST00000527275 RSPRY1Q96DX4 576 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 SERPINB12Q96P63 405 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 DDX50Q9BQ39 737 aaKnown RBP19.22■□□□□ 0.67
SMPD1-203ENST00000527275 CCDC77Q9BR77 488 aa19.22■□□□□ 0.67
SMPD1-203ENST00000527275 COL6A3P12111 3177 aa19.21■□□□□ 0.67
SMPD1-203ENST00000527275 TCEA3O75764 348 aa19.21■□□□□ 0.67
SMPD1-203ENST00000527275 ABHD2P08910 425 aa19.21■□□□□ 0.67
SMPD1-203ENST00000527275 RHOQP17081 205 aa19.21■□□□□ 0.67
SMPD1-203ENST00000527275 MTHFRP42898 656 aa19.21■□□□□ 0.67
SMPD1-203ENST00000527275 SKIV2LQ15477 1246 aaKnown RBP19.21■□□□□ 0.67
SMPD1-203ENST00000527275 FNBP1LQ5T0N5 605 aa19.21■□□□□ 0.67
SMPD1-203ENST00000527275 FAM182AQ5T1J6 154 aa19.21■□□□□ 0.67
SMPD1-203ENST00000527275 PPM1EQ8WY54 764 aa19.21■□□□□ 0.67
SMPD1-203ENST00000527275 MYADMQ96S97 322 aa19.21■□□□□ 0.67
SMPD1-203ENST00000527275 PHACTR1Q9C0D0 580 aa19.21■□□□□ 0.67
SMPD1-203ENST00000527275 STMN4Q9H169 189 aaPredicted RBP19.21■□□□□ 0.67
SMPD1-203ENST00000527275 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.21■□□□□ 0.67
SMPD1-203ENST00000527275 NUP210Q8TEM1 1887 aaPredicted RBP19.21■□□□□ 0.67
SMPD1-203ENST00000527275 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.2■□□□□ 0.66
SMPD1-203ENST00000527275 TMEM63AO94886 807 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 FOSL2P15408 326 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 KCNA5P22460 613 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 USP4Q13107 963 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 STAT4Q14765 748 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 TNFAIP8L3Q5GJ75 292 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 LEKR1Q6ZMV7 388 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 BHMTQ93088 406 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 P2RY11Q96G91 374 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 CELF6Q96J87 481 aaKnown RBP19.2■□□□□ 0.66
SMPD1-203ENST00000527275 QKIQ96PU8 341 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMPD1-203ENST00000527275 KLC2Q9H0B6 622 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 LINC00597Q9H2U6 94 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 RAB6BQ9NRW1 208 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 ZNF212Q9UDV6 495 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 CD207Q9UJ71 328 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 USP15Q9Y4E8 981 aaPredicted RBP19.2■□□□□ 0.66
SMPD1-203ENST00000527275 A0A087WUV0 522 aaPredicted RBP19.2■□□□□ 0.66
SMPD1-203ENST00000527275 ERICH4A6NGS2 130 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 GFRA2O00451 464 aa19.2■□□□□ 0.66
SMPD1-203ENST00000527275 TCF3P15923 654 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms