RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 SHROOM3Q8TF72 1996 aa16.56■□□□□ 0.24
PTPRU-210ENST00000527027 ZNF462Q96JM2 2506 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.55■□□□□ 0.24
PTPRU-210ENST00000527027 MT-CO3P00414 261 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 CD44P16070 742 aaKnown RBP16.55■□□□□ 0.24
PTPRU-210ENST00000527027 DGKAP23743 735 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 PPP1R2P41236 205 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 TAS2R38P59533 333 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 DAB2P98082 770 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 TLE3Q04726 772 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 CCDC173Q0VFZ6 552 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 KCNH2Q12809 1159 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 ZNF177Q13360 481 aaPredicted RBP16.55■□□□□ 0.24
PTPRU-210ENST00000527027 ISM2Q6H9L7 571 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 KDM7AQ6ZMT4 941 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 Q6ZVU0 165 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 ERICH1Q86X53 443 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 RNF34Q969K3 372 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 RPRD1AQ96P16 312 aaPredicted RBP16.55■□□□□ 0.24
PTPRU-210ENST00000527027 FAM204AQ9H8W3 233 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 KLHL11Q9NVR0 708 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 DDIT4Q9NX09 232 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 HOOK1Q9UJC3 728 aaKnown RBP16.55■□□□□ 0.24
PTPRU-210ENST00000527027 OR51B4Q9Y5P0 310 aa16.55■□□□□ 0.24
PTPRU-210ENST00000527027 TP53BP1Q12888 1972 aaPredicted RBP16.55■□□□□ 0.24
PTPRU-210ENST00000527027 GOLGA6L4A6NEF3 574 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 SLC31A1O15431 190 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 GLI1P08151 1106 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 THEGLP0DJG4 465 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 CENPCQ03188 943 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 KCNMA1Q12791 1236 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 PDCLQ13371 301 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 AUHQ13825 339 aaKnown RBP16.54■□□□□ 0.24
PTPRU-210ENST00000527027 HS1BP3Q53T59 392 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 TTI2Q6NXR4 508 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 NEK5Q6P3R8 708 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 TRIM59Q8IWR1 403 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 SPACA3Q8IXA5 215 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 DEFB106AQ8N104 65 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 SH2D3CQ8N5H7 860 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 TMEM145Q8NBT3 493 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 OR52K2Q8NGK3 314 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 OR4C6Q8NH72 309 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 UBE2TQ9NPD8 197 aaPredicted RBP16.54■□□□□ 0.24
PTPRU-210ENST00000527027 VPS28Q9UK41 221 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 FARP1Q9Y4F1 1045 aaPredicted RBP16.54■□□□□ 0.24
PTPRU-210ENST00000527027 ATMQ13315 3056 aa16.54■□□□□ 0.24
PTPRU-210ENST00000527027 SYNJ2BP-COX16A0A087WUM0 186 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 A0A1W2PQU0 124 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 THAP12O43422 761 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 BNIP3LO60238 219 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 CLDN11O75508 207 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 GNA15P30679 374 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 CCDC15Q0P6D6 951 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 MTA1Q13330 715 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 EFHC1Q5JVL4 640 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 PIP5KL1Q5T9C9 394 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 FOXR2Q6PJQ5 311 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 ZNF605Q86T29 641 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 ZNF248Q8NDW4 579 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 TIGD1Q96MW7 591 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 SLC2A13Q96QE2 648 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 INTS2Q9H0H0 1204 aaKnown RBP16.53■□□□□ 0.24
PTPRU-210ENST00000527027 ASNSD1Q9NWL6 643 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 UCKL1Q9NWZ5 548 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 COX16Q9P0S2 106 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 VANGL2Q9ULK5 521 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 TBC1D30Q9Y2I9 924 aa16.53■□□□□ 0.24
PTPRU-210ENST00000527027 OPA1O60313 960 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 GNA14O95837 355 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 AFPP02771 609 aaKnown RBP16.52■□□□□ 0.24
PTPRU-210ENST00000527027 GIMD1P0DJR0 217 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 CKMT1AP12532 417 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 SRCP12931 536 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 PRLRP16471 622 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 IRAK1P51617 712 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 CXADRP78310 365 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 CDCP2Q5VXM1 449 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 KLHL10Q6JEL2 608 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 TMC6Q7Z403 805 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 HORMAD1Q86X24 394 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 LSMEM2Q8N112 164 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 ZNF843Q8N446 348 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 WDTC1Q8N5D0 677 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 TMIEQ8NEW7 156 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 NELFBQ8WX92 580 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 KLK6Q92876 244 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 ZNF578Q96N58 590 aaPredicted RBP16.52■□□□□ 0.24
PTPRU-210ENST00000527027 LGMNQ99538 433 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 MYOCQ99972 504 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 ACP6Q9NPH0 428 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 MAN1B1Q9UKM7 699 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 HS3ST2Q9Y278 367 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 PCDHB1Q9Y5F3 818 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.52■□□□□ 0.24
PTPRU-210ENST00000527027 HS3ST4Q9Y661 456 aa16.52■□□□□ 0.24
PTPRU-210ENST00000527027 MYLKQ15746 1914 aa16.52■□□□□ 0.23
PTPRU-210ENST00000527027 TENM4Q6N022 2769 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 BICDL2A1A5D9 508 aa16.51■□□□□ 0.23
PTPRU-210ENST00000527027 PPP1R3GB7ZBB8 358 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms