RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 DFFAO00273 331 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 DLDP09622 509 aaKnown RBP16.89■□□□□ 0.29
CAPN1-205ENST00000526954 CHRM1P11229 460 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-205ENST00000526954 GARSP41250 739 aaKnown RBP16.89■□□□□ 0.29
CAPN1-205ENST00000526954 ZNF33AQ06730 810 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 SLC20A2Q08357 652 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 PDK1Q15118 436 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 E2F5Q15329 346 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 DGKKQ5KSL6 1271 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 NPNTQ6UXI9 565 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 SYNPOQ8N3V7 929 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 TTC13Q8NBP0 860 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 NETO2Q8NC67 525 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 CCDC26Q8TAB7 109 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 ACTRT1Q8TDG2 376 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 UCMAQ8WVF2 138 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 MAIP1Q8WWC4 291 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 HDAC11Q96DB2 347 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 TSGA13Q96PP4 275 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 BRD8Q9H0E9 1235 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 LTB4R2Q9NPC1 389 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 VCANP13611 3396 aa16.89■□□□□ 0.29
CAPN1-205ENST00000526954 MUC22E2RYF6 1773 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 TCRBV7S2A1N4TA0A589 114 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 ZSCAN5CA6NGD5 496 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 CBX4O00257 560 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 NPC1O15118 1278 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 ZNF500O60304 480 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 SNAP91O60641 907 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 MAFKO60675 156 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 PRAMEF11O60813 436 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 SLC34A2O95436 690 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 FGGP02679 453 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 SRPRAP08240 638 aaKnown RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 CHRNB1P11230 501 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 HNRNPLP14866 589 aaKnown RBP eCLIP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 PECAM1P16284 738 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 CCNCP24863 283 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 KIR2DL1P43626 348 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 ARF5P84085 180 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 ECT2LQ008S8 904 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 IL10RBQ08334 325 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 XRCC4Q13426 336 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 NOMO1Q15155 1222 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 PTPRNQ16849 979 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 CCDC181Q5TID7 509 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 RETSATQ6NUM9 610 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 TRIM67Q6ZTA4 783 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 ATPAF2Q8N5M1 289 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 KDM1BQ8NB78 822 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 FATE1Q969F0 183 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 NAP1L3Q99457 506 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 FRMD8P1Q9BZ68 369 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 CIPCQ9C0C6 399 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 TBC1D17Q9HA65 648 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 THAP10Q9P2Z0 257 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 SAE1Q9UBE0 346 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 IPO11Q9UI26 975 aaKnown RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 HCN2Q9UL51 889 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 NDRG2Q9UN36 371 aaKnown RBP16.88■□□□□ 0.29
CAPN1-205ENST00000526954 ERVW-1Q9UQF0 538 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 HS3ST2Q9Y278 367 aa16.88■□□□□ 0.29
CAPN1-205ENST00000526954 ATG2BQ96BY7 2078 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 TECTAO75443 2155 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 ESPNB1AK53 854 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 PPP1R12AO14974 1030 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-205ENST00000526954 ZNF185O15231 689 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 GLDCP23378 1020 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 TARSP26639 723 aaKnown RBP16.87■□□□□ 0.29
CAPN1-205ENST00000526954 CTSOP43234 321 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-205ENST00000526954 GEMIN4P57678 1058 aaKnown RBP16.87■□□□□ 0.29
CAPN1-205ENST00000526954 MRPS21P82921 87 aaKnown RBP16.87■□□□□ 0.29
CAPN1-205ENST00000526954 OTUD4Q01804 1114 aaKnown RBP16.87■□□□□ 0.29
CAPN1-205ENST00000526954 PPIDQ08752 370 aaKnown RBP16.87■□□□□ 0.29
CAPN1-205ENST00000526954 FZD5Q13467 585 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 SIX1Q15475 284 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-205ENST00000526954 LONRF2Q1L5Z9 754 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 ARHGAP36Q6ZRI8 547 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 ZNF354CQ86Y25 554 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 ACTL9Q8TC94 416 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 SORCS1Q8WY21 1168 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 MS4A14Q96JA4 679 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 MRGPRX3Q96LB0 322 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 PDFQ9HBH1 243 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 RNF14Q9UBS8 474 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 PLA2G4CQ9UP65 541 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 MTF2Q9Y483 593 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-205ENST00000526954 BDP1A6H8Y1 2624 aa16.87■□□□□ 0.29
CAPN1-205ENST00000526954 FAM170BA6NMN3 283 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 HACD1B0YJ81 288 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 J3KR12 359 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 PGRMC1O00264 195 aaKnown RBP16.86■□□□□ 0.29
CAPN1-205ENST00000526954 MAP3K6O95382 1288 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 CD160O95971 181 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 ENPP2Q13822 863 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 LRRC32Q14392 662 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 HSF5Q4G112 596 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-205ENST00000526954 INO80DQ53TQ3 878 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-205ENST00000526954 EMC10Q5UCC4 262 aa16.86■□□□□ 0.29
CAPN1-205ENST00000526954 TIGD7Q6NT04 549 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms