RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 SLC25A13Q9UJS0 675 aa21.24■□□□□ 0.99
CD44-222ENST00000526025 HPCAL4Q9UM19 191 aa21.24■□□□□ 0.99
CD44-222ENST00000526025 STON1Q9Y6Q2 735 aa21.24■□□□□ 0.99
CD44-222ENST00000526025 ARHGAP42A6NI28 874 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 RASA4BC9J798 803 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 RASA4O43374 803 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 KDELR3O43731 214 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 ADAM23O75077 832 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 TNNT1P13805 278 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 NNMTP40261 264 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 IL12RB1P42701 662 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 CDKN2BP42772 138 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 CXCL12P48061 93 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 CLCN6P51797 869 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 RWDD2BP57060 319 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 MMRN1Q13201 1228 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 SERINC3Q13530 473 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 PPP2R5EQ16537 467 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 SERPINA13PQ6UXR4 307 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 METTL3Q86U44 580 aaKnown RBP21.23■□□□□ 0.99
CD44-222ENST00000526025 LRRC49Q8IUZ0 686 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 C1orf210Q8IVY1 113 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 ARHGAP12Q8IWW6 846 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 NPWQ8N729 165 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 CYB5D2Q8WUJ1 264 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 ETNK2Q9NVF9 386 aa21.23■□□□□ 0.99
CD44-222ENST00000526025 SPATA6Q9NWH7 488 aaPredicted RBP21.23■□□□□ 0.99
CD44-222ENST00000526025 ANTXRLA6NF34 631 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 SGK1O00141 431 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 ATP9BO43861 1147 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 ZFXP17010 805 aaPredicted RBP21.22■□□□□ 0.99
CD44-222ENST00000526025 HOXA6P31267 233 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 PTPN7P35236 360 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 ACVRL1P37023 503 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 CTSOP43234 321 aaPredicted RBP21.22■□□□□ 0.99
CD44-222ENST00000526025 MARCKSL1P49006 195 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 DGKEP52429 567 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 FNDC3BQ53EP0 1204 aaKnown RBP21.22■□□□□ 0.99
CD44-222ENST00000526025 NCBP2-AS2Q69YL0 99 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 SLC9A4Q6AI14 798 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 IL31Q6EBC2 164 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 MFSD7Q6UXD7 560 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 SPOCD1Q6ZMY3 1216 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 PQLC3Q8N755 202 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 CASKIN2Q8WXE0 1202 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 HMCESQ96FZ2 354 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 ACOX2Q99424 681 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 PRRX2Q99811 253 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 SPON2Q9BUD6 331 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 FBRSQ9HAH7 460 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 KCND1Q9NSA2 647 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 CACNA2D2Q9NY47 1150 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 FBXO4Q9UKT5 387 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 EFR3BQ9Y2G0 817 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 RAD54BQ9Y620 910 aa21.22■□□□□ 0.99
CD44-222ENST00000526025 FTCDO95954 541 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 C7P10643 843 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 ARF5P84085 180 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 TFDP2Q14188 446 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 CRY1Q16526 586 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 TFDP3Q5H9I0 405 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 SH2D3CQ8N5H7 860 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 CCDC33Q8N5R6 958 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 CAMKK1Q8N5S9 505 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 RNF25Q96BH1 459 aaPredicted RBP21.21■□□□□ 0.99
CD44-222ENST00000526025 MAK16Q9BXY0 300 aaKnown RBP21.21■□□□□ 0.99
CD44-222ENST00000526025 SLC39A8Q9C0K1 460 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 CD248Q9HCU0 757 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 SUN2Q9UH99 717 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 SLC8A2Q9UPR5 921 aa21.21■□□□□ 0.99
CD44-222ENST00000526025 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.21■□□□□ 0.99
CD44-222ENST00000526025 SHROOM3Q8TF72 1996 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 A0A1W2PQF6 199 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 CBX4O00257 560 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 DDX3YO15523 660 aaKnown RBP21.2■□□□□ 0.98
CD44-222ENST00000526025 LAMTOR5O43504 91 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 GALR2O43603 387 aaPredicted RBP21.2■□□□□ 0.98
CD44-222ENST00000526025 SNAP91O60641 907 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 HOXB2P14652 356 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 CETN2P41208 172 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 SERPINH1P50454 418 aaKnown RBP21.2■□□□□ 0.98
CD44-222ENST00000526025 STARD3Q14849 445 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 HNRNPA1L2Q32P51 320 aaKnown RBP21.2■□□□□ 0.98
CD44-222ENST00000526025 MEI1Q5TIA1 1274 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.2■□□□□ 0.98
CD44-222ENST00000526025 ALG3Q92685 438 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 CEP44Q9C0F1 390 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 PYCARDQ9ULZ3 195 aa21.2■□□□□ 0.98
CD44-222ENST00000526025 hCG_1818297A0A087WSY0 165 aa21.19■□□□□ 0.98
CD44-222ENST00000526025 TARSL2A2RTX5 802 aaKnown RBP21.19■□□□□ 0.98
CD44-222ENST00000526025 APOL1O14791 398 aa21.19■□□□□ 0.98
CD44-222ENST00000526025 PRKCHP24723 683 aa21.19■□□□□ 0.98
CD44-222ENST00000526025 STK19P49842 368 aaPredicted RBP21.19■□□□□ 0.98
CD44-222ENST00000526025 SATB1Q01826 763 aa21.19■□□□□ 0.98
CD44-222ENST00000526025 GALNT2Q10471 571 aa21.19■□□□□ 0.98
CD44-222ENST00000526025 CAMK2GQ13555 558 aaPredicted RBP21.19■□□□□ 0.98
CD44-222ENST00000526025 INO80DQ53TQ3 878 aaPredicted RBP21.19■□□□□ 0.98
CD44-222ENST00000526025 PLD5Q8N7P1 536 aa21.19■□□□□ 0.98
CD44-222ENST00000526025 FRS2Q8WU20 508 aa21.19■□□□□ 0.98
CD44-222ENST00000526025 ISG20Q96AZ6 181 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms