RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 BECN2A8MW95 431 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 KLKB1P03952 638 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 HMGB1P09429 215 aaKnown RBP4.38□□□□□ -1.71
CD44-217ENST00000525348 SELENOVP59797 346 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 GPR162Q16538 588 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 PLK5Q496M5 336 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 GXYLT1Q4G148 440 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 TMEM71Q6P5X7 295 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 AAGABQ6PD74 315 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 PTGR2Q8N8N7 351 aaPredicted RBP4.38□□□□□ -1.71
CD44-217ENST00000525348 LRRC57Q8N9N7 239 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 MIB2Q96AX9 1013 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 POLDIP3Q9BY77 421 aaKnown RBP4.38□□□□□ -1.71
CD44-217ENST00000525348 TRIM31Q9BZY9 425 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 B3GNT4Q9C0J1 378 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 HIPK3Q9H422 1215 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 WDR26Q9H7D7 661 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 ACAD9Q9H845 621 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 ACTR5Q9H9F9 607 aaPredicted RBP4.38□□□□□ -1.71
CD44-217ENST00000525348 PLEKHA2Q9HB19 425 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 RNF146Q9NTX7 359 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 KLQ9UEF7 1012 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 PLEKHB1Q9UF11 243 aaPredicted RBP4.38□□□□□ -1.71
CD44-217ENST00000525348 SLC25A13Q9UJS0 675 aa4.38□□□□□ -1.71
CD44-217ENST00000525348 GAGE12JA6NER3 117 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 HMX3A6NHT5 357 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 E7EVH7 732 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 I6L893 689 aaPredicted RBP4.37□□□□□ -1.71
CD44-217ENST00000525348 LCATP04180 440 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 CSF1P09603 554 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 ARSAP15289 507 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 CST5P28325 142 aaPredicted RBP4.37□□□□□ -1.71
CD44-217ENST00000525348 CHKAP35790 457 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 RFX2P48378 723 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 RASSF2P50749 326 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 CYP2J2P51589 502 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 TMPRSS3P57727 454 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 ALKBH1Q13686 389 aaKnown RBP4.37□□□□□ -1.71
CD44-217ENST00000525348 SMAD1Q15797 465 aaKnown RBP4.37□□□□□ -1.71
CD44-217ENST00000525348 FAM171A1Q5VUB5 890 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 FAM217AQ8IXS0 508 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 WASF1Q92558 559 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 TAF1DQ9H5J8 278 aaPredicted RBP4.37□□□□□ -1.71
CD44-217ENST00000525348 PLAC1Q9HBJ0 212 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 G6PC2Q9NQR9 355 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 ZDHHC7Q9NXF8 308 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 UPB1Q9UBR1 384 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 PCDHA7Q9UN72 937 aa4.37□□□□□ -1.71
CD44-217ENST00000525348 A0A1B0GVT2 93 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 INAFM1C9JVW0 142 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 HNRNPRO43390 633 aaKnown RBP4.36□□□□□ -1.71
CD44-217ENST00000525348 RGS14O43566 566 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 KRT38O76015 456 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 NGFRP08138 427 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 FCGR2AP12318 317 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 HOXB6P17509 224 aaKnown RBP4.36□□□□□ -1.71
CD44-217ENST00000525348 CHRNB2P17787 502 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 GSTM2P28161 218 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 CUL4BQ13620 913 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 DUSP6Q16828 381 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 C5orf22Q49AR2 442 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 KLHL22Q53GT1 634 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 Q6ZTK2 550 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 TRILQ7L0X0 811 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 TRIM74Q86UV6 250 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 TRIM73Q86UV7 250 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 TICAM2Q86XR7 235 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 GABPB2Q8TAK5 448 aaPredicted RBP4.36□□□□□ -1.71
CD44-217ENST00000525348 RILPL2Q969X0 211 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 RMI1Q9H9A7 625 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 KRCC1Q9NPI7 259 aaPredicted RBP4.36□□□□□ -1.71
CD44-217ENST00000525348 TLR8Q9NR97 1041 aaKnown RBP4.36□□□□□ -1.71
CD44-217ENST00000525348 BAG5Q9UL15 447 aa4.36□□□□□ -1.71
CD44-217ENST00000525348 SYN3O14994 580 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 FAM155BO75949 473 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 UNGP13051 313 aaPredicted RBP4.35□□□□□ -1.71
CD44-217ENST00000525348 ARSBP15848 533 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 TRAPPC10P48553 1259 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 PMS2P54278 862 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 OAZ1P54368 228 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 GPS2Q13227 327 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 POSTNQ15063 836 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 ZNF484Q5JVG2 852 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 C10orf62Q5T681 223 aaPredicted RBP4.35□□□□□ -1.71
CD44-217ENST00000525348 KIAA1161Q6NSJ0 714 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 GALNT7Q86SF2 657 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 IGFN1Q86VF2 1251 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 MYCT1Q8N699 235 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 PRR26Q8N8Z3 221 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 KTI12Q96EK9 354 aaPredicted RBP4.35□□□□□ -1.71
CD44-217ENST00000525348 NAP1L5Q96NT1 182 aaPredicted RBP4.35□□□□□ -1.71
CD44-217ENST00000525348 ZPBPQ9BS86 351 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 THAP1Q9NVV9 213 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 PTGDR2Q9Y5Y4 395 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 CLSPNQ9HAW4 1339 aa4.35□□□□□ -1.71
CD44-217ENST00000525348 LACTBL1A8MY62 500 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 STMND1H3BQB6 276 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 SLC28A2O43868 658 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 TMCC1O94876 653 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 DDAH2O95865 285 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms