RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CDH4P55283 916 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 GNG11P61952 73 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 AMPD2Q01433 879 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 KRT81Q14533 505 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 HADHQ16836 314 aaKnown RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 ARL13BQ3SXY8 428 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 TMEM196Q5HYL7 178 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 PITRM1Q5JRX3 1037 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 SLC9A4Q6AI14 798 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 SYT10Q6XYQ8 523 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 PRUNE1Q86TP1 453 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 RFX6Q8HWS3 928 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 PSTKQ8IV42 348 aaKnown RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 MFN1Q8IWA4 741 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.65□□□□□ -1.34
CD44-214ENST00000525211 KIAA1958Q8N8K9 716 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 TERB1Q8NA31 727 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 HJURPQ8NCD3 748 aaPredicted RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 FIBINQ8TAL6 211 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 CSGALNACT1Q8TDX6 532 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 ATG4AQ8WYN0 398 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 FAM3CQ92520 227 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 DNASE1L2Q92874 299 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 ARHGEF2Q92974 986 aaKnown RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 OTUB2Q96DC9 234 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 RPL10LQ96L21 214 aaKnown RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 FEM1AQ9BSK4 669 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 ZYG11BQ9C0D3 744 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 TBC1D17Q9HA65 648 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 ARHGEF3Q9NR81 526 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 DTLQ9NZJ0 730 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 SLC12A6Q9UHW9 1150 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 SLCO3A1Q9UIG8 710 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 GGA2Q9UJY4 613 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 TBC1D30Q9Y2I9 924 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 MYO18AQ92614 2054 aaKnown RBP6.65□□□□□ -1.35
CD44-214ENST00000525211 CHD5Q8TDI0 1954 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.64□□□□□ -1.35
CD44-214ENST00000525211 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.64□□□□□ -1.35
CD44-214ENST00000525211 RASA4BC9J798 803 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 H0Y626 953 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 H3BRJ5 948 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 KCNK3O14649 394 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 MUSKO15146 869 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 RASA4O43374 803 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 CST8O60676 142 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 ADAM23O75077 832 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 ZNF821O75541 412 aaPredicted RBP6.64□□□□□ -1.35
CD44-214ENST00000525211 KAT7O95251 611 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 ADH1CP00326 375 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 RHOCP08134 193 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 KRT7P08729 469 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 CHRNB1P11230 501 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 HLA-EP13747 358 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 PRKCHP24723 683 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 OR1E1P30953 314 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 RGRP47804 291 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 HCAR3P49019 387 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 DGKGP49619 791 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 METAP1P53582 386 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 RWDD2BP57060 319 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 STARD6P59095 220 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 ARF5P84085 180 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 GNA12Q03113 381 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 KCNC4Q03721 635 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 KLF1Q13351 362 aaPredicted RBP6.64□□□□□ -1.35
CD44-214ENST00000525211 ZNF177Q13360 481 aaPredicted RBP6.64□□□□□ -1.35
CD44-214ENST00000525211 PAFAH1B3Q15102 231 aaKnown RBP6.64□□□□□ -1.35
CD44-214ENST00000525211 PDK2Q15119 407 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 RPS6KA1Q15418 735 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 CYTH1Q15438 398 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 PLEKHG6Q3KR16 790 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 HS1BP3Q53T59 392 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 C2orf27AQ580R0 203 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 RABGAP1LQ5R372 815 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 MPP7Q5T2T1 576 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 ZFYVE27Q5T4F4 411 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 MBLAC2Q68D91 279 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 GRAMD4Q6IC98 578 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 KIAA1211LQ6NV74 962 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 LRRC31Q6UY01 552 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 CHST9Q7L1S5 443 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 RCOR2Q8IZ40 523 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 UMODL1-AS1Q8N2C9 162 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 PGBD5Q8N414 524 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 TRIM58Q8NG06 486 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 EXD1Q8NHP7 514 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 EDAQ92838 391 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 TTC17Q96AE7 1141 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 C16orf45Q96MC5 204 aaPredicted RBP6.64□□□□□ -1.35
CD44-214ENST00000525211 PNKPQ96T60 521 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 P2RY13Q9BPV8 354 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 ARHGAP9Q9BRR9 750 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 ZNF670Q9BS34 389 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 SPON2Q9BUD6 331 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 ACE2Q9BYF1 805 aaPredicted RBP6.64□□□□□ -1.35
CD44-214ENST00000525211 OSBPL8Q9BZF1 889 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 SLC6A17Q9H1V8 727 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 PDFQ9HBH1 243 aa6.64□□□□□ -1.35
CD44-214ENST00000525211 CD248Q9HCU0 757 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms