RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 EIF4EBP2Q13542 120 aaPredicted RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 SNX1Q13596 522 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 DPYSQ14117 519 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 PPP2R5DQ14738 602 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 PAFAH1B3Q15102 231 aaKnown RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 PDK1Q15118 436 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 TAF5Q15542 800 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 TPSAB1Q15661 275 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 HIF1AQ16665 826 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 ARHGAP15Q53QZ3 475 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 DCAF6Q58WW2 860 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 SLC45A4Q5BKX6 768 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 ZC3H12AQ5D1E8 599 aaKnown RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 CEP85LQ5SZL2 805 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 OTUD1Q5VV17 481 aaPredicted RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 TXNDC8Q6A555 127 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 MSANTD2Q6P1R3 559 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 TAOK1Q7L7X3 1001 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 BHLHA9Q7RTU4 235 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 BMP8AQ7Z5Y6 402 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 ARID3BQ8IVW6 561 aaPredicted RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 DEFB106AQ8N104 65 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 LZTR1Q8N653 840 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 PQLC3Q8N755 202 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 MAB21L3Q8N8X9 362 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 NAT8LQ8N9F0 302 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 MCUQ8NE86 351 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 RIN3Q8TB24 985 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 PRCCQ92733 491 aaPredicted RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 ELSPBP1Q96BH3 223 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 CENPTQ96BT3 561 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 SPATA17Q96L03 361 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 GCNAQ96QF7 691 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 SLC22A12Q96S37 553 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 HAPLN3Q96S86 360 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 CDK5RAP1Q96SZ6 601 aaKnown RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 RBM15Q96T37 977 aaKnown RBP eCLIP7.27□□□□□ -1.25
VPS11-201ENST00000524454 SLC46A2Q9BY10 475 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 ULBP1Q9BZM6 244 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 KLC2Q9H0B6 622 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 OSBPL2Q9H1P3 480 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 CDC42EP4Q9H3Q1 356 aaKnown RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 TBC1D17Q9HA65 648 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 ZFP14Q9HCL3 533 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 EIF2B3Q9NR50 452 aaKnown RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 ARHGEF3Q9NR81 526 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 HEBP1Q9NRV9 189 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 FAM86C1Q9NVL1 165 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 KLHL11Q9NVR0 708 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 CLIC5Q9NZA1 410 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 SCML2Q9UQR0 700 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 CCL26Q9Y258 94 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 MTF2Q9Y483 593 aaPredicted RBP7.27□□□□□ -1.25
VPS11-201ENST00000524454 ASB3Q9Y575 518 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 ZNF318Q5VUA4 2279 aa7.27□□□□□ -1.25
VPS11-201ENST00000524454 A0A087WUV0 522 aaPredicted RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 C2orf78A6NCI8 922 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 YJEFN3A6XGL0 299 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 ERI2A8K979 691 aaKnown RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 E7ENQ6 273 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 M0QYT0 321 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 AP3B1O00203 1094 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 SCAMP3O14828 347 aaKnown RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 FGF10O15520 208 aaPredicted RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 ZBTB24O43167 697 aaPredicted RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 OPHN1O60890 802 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 GRAP2O75791 330 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 BEST1O76090 585 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 FYNP06241 537 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 CD48P09326 243 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 CSH1P0DML2 217 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 CSH2P0DML3 217 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 PECAM1P16284 738 aaPredicted RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 FDFT1P37268 417 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 SOX9P48436 509 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 SLC18A1P54219 525 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 RPL10AP62906 217 aaKnown RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 TNK2Q07912 1038 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 SLC29A2Q14542 456 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 PRKD1Q15139 912 aaPredicted RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 CDO1Q16878 200 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 KRT71Q3SY84 523 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 SLC44A4Q53GD3 710 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 TTMPQ5BVD1 217 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 SH3PXD2AQ5TCZ1 1133 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 SCYL2Q6P3W7 929 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 ZNF449Q6P9G9 518 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 TPRG1Q6ZUI0 275 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 CYS1Q717R9 158 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 MON1AQ86VX9 555 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 CCNJLQ8IV13 435 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 PDIK1LQ8N165 341 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 ATP11CQ8NB49 1132 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 LEMD2Q8NC56 503 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 CLEC4CQ8WTT0 213 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 RNF139Q8WU17 664 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 OVCA2Q8WZ82 227 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 FATE1Q969F0 183 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 NXPE3Q969Y0 559 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 SERPINB11Q96P15 392 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms