RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 DCAF4L2Q8NA75 395 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 TPCN2Q8NHX9 752 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 RAPGEF5Q92565 580 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 TSC1Q92574 1164 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 HMCESQ96FZ2 354 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 CSPG4P5Q96PW8 444 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 KCNH6Q9H252 994 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 ZSCAN32Q9NX65 697 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 SDK1Q7Z5N4 2213 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 MACROD2A1Z1Q3 448 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 RASA4BC9J798 803 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 NPC1O15118 1278 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 AXIN1O15169 862 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 ARHGAP6O43182 974 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 RASA4O43374 803 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 SMAD6O43541 496 aaKnown RBP13.12□□□□□ -0.31
VEGFA-224ENST00000523873 SPOPO43791 374 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 BNIP3LO60238 219 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 SYNCRIPO60506 623 aaKnown RBP13.12□□□□□ -0.31
VEGFA-224ENST00000523873 SRCP12931 536 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 IL4RP24394 825 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 MARCKSL1P49006 195 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 COPAP53621 1224 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 SULT2A1Q06520 285 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 STARD3Q14849 445 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 POLD3Q15054 466 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-224ENST00000523873 ACCSLQ4AC99 568 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 KIAA1324Q6UXG2 1013 aaKnown RBP13.12□□□□□ -0.31
VEGFA-224ENST00000523873 ZNF783Q6ZMS7 281 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 WDR5BQ86VZ2 330 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 LONP2Q86WA8 852 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 FRMD1Q8N878 549 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 KCTD6Q8NC69 237 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 CCDC112Q8NEF3 446 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 RLN3Q8WXF3 142 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 CALN1Q9BXU9 219 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 ACE2Q9BYF1 805 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-224ENST00000523873 SLC39A8Q9C0K1 460 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 MKRN2Q9H000 416 aaKnown RBP13.12□□□□□ -0.31
VEGFA-224ENST00000523873 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 LCMT1Q9UIC8 334 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 ADGRG1Q9Y653 693 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 ALG6Q9Y672 507 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 MUC6Q6W4X9 2439 aa13.12□□□□□ -0.31
VEGFA-224ENST00000523873 GRID2IPA4D2P6 1211 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 DCLK1O15075 740 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 HRO43593 1189 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 ALDH1A2O94788 518 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 CD160O95971 181 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 KRT1P04264 644 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 KRT7P08729 469 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 KDELR1P24390 212 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 HOXA6P31267 233 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 HTR7P34969 479 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 SLC1A1P43005 524 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 HCAR3P49019 387 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 NHLH1Q02575 133 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 CAMK2GQ13555 558 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-224ENST00000523873 HNRNPA1L2Q32P51 320 aaKnown RBP13.11□□□□□ -0.31
VEGFA-224ENST00000523873 C11orf63Q6NUN7 778 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 ARHGAP36Q6ZRI8 547 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 Q6ZVU0 165 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 DAAM2Q86T65 1068 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 ARHGAP12Q8IWW6 846 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 UMODL1-AS1Q8N2C9 162 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 STK40Q8N2I9 435 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 SH2D3CQ8N5H7 860 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-224ENST00000523873 ATP11CQ8NB49 1132 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 ZBTB44Q8NCP5 570 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 OR2T3Q8NH03 318 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 FAM71BQ8TC56 605 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 FRS2Q8WU20 508 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 PTPRN2Q92932 1015 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-224ENST00000523873 MRGPRX1Q96LB2 322 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 ZNF830Q96NB3 372 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-224ENST00000523873 C2orf49Q9BVC5 232 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-224ENST00000523873 MAGEH1Q9H213 219 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 TNKS2Q9H2K2 1166 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 LRRC19Q9H756 370 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 EBF1Q9UH73 591 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 SUN2Q9UH99 717 aa13.11□□□□□ -0.31
VEGFA-224ENST00000523873 FCF1Q9Y324 198 aaKnown RBP13.11□□□□□ -0.31
VEGFA-224ENST00000523873 LRRD1A4D1F6 860 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 BTNL10A8MVZ5 291 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 DFFAO00273 331 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 KDELR3O43731 214 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 ATP9BO43861 1147 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 LILRB5O75023 590 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 MAP3K6O95382 1288 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 NNMTP40261 264 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 PAPOLAP51003 745 aaKnown RBP13.1□□□□□ -0.31
VEGFA-224ENST00000523873 NRLP54845 237 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 KIF5AQ12840 1032 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 E2F5Q15329 346 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 LLGL1Q15334 1064 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 DLG2Q15700 870 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 LPAL2Q16609 132 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms