RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 ERGIC2Q96RQ1 377 aa11.18□□□□□ -0.62
PVT1-216ENST00000523068 KDM4CQ9H3R0 1056 aa11.18□□□□□ -0.62
PVT1-216ENST00000523068 ANLNQ9NQW6 1124 aa11.18□□□□□ -0.62
PVT1-216ENST00000523068 TM7SF3Q9NS93 570 aa11.18□□□□□ -0.62
PVT1-216ENST00000523068 SERGEFQ9UGK8 458 aa11.18□□□□□ -0.62
PVT1-216ENST00000523068 HS3ST2Q9Y278 367 aa11.18□□□□□ -0.62
PVT1-216ENST00000523068 ANKRD6Q9Y2G4 727 aa11.18□□□□□ -0.62
PVT1-216ENST00000523068 PCDHGB2Q9Y5G2 931 aa11.18□□□□□ -0.62
PVT1-216ENST00000523068 CHD5Q8TDI0 1954 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 SPAARA0A1B0GVQ0 90 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 FAM170AA1A519 330 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 I6L893 689 aaPredicted RBP11.17□□□□□ -0.62
PVT1-216ENST00000523068 MCF2LO15068 1137 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 EPHB6O15197 1021 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 SLC7A4O43246 635 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 SH3BP5O60239 455 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 DFNA5O60443 496 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 SRGAP2O75044 1071 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 CALB1P05937 261 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 UNGP13051 313 aaPredicted RBP11.17□□□□□ -0.62
PVT1-216ENST00000523068 VAV1P15498 845 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 CHRNB2P17787 502 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 CLCN6P51797 869 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 ADPRHP54922 357 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 GSCP56915 257 aaPredicted RBP11.17□□□□□ -0.62
PVT1-216ENST00000523068 C21orf59P57076 290 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 ATP11AP98196 1134 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 CCDC15Q0P6D6 951 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 CCDC173Q0VFZ6 552 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 TRIP6Q15654 476 aaKnown RBP11.17□□□□□ -0.62
PVT1-216ENST00000523068 DLG2Q15700 870 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 ZNF423Q2M1K9 1284 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 KIF19Q2TAC6 998 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 TRNP1Q6NT89 227 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 STRADAQ7RTN6 431 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 ZNF683Q8IZ20 524 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 EMC1Q8N766 993 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 DCAF4L2Q8NA75 395 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 ATP11CQ8NB49 1132 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 SLC30A5Q8TAD4 765 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 SETD7Q8WTS6 366 aaKnown RBP11.17□□□□□ -0.62
PVT1-216ENST00000523068 C11orf70Q9BRQ4 267 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 ACE2Q9BYF1 805 aaPredicted RBP11.17□□□□□ -0.62
PVT1-216ENST00000523068 ZYG11BQ9C0D3 744 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 RETREG1Q9H6L5 497 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 MPP6Q9NZW5 540 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 ADAM22Q9P0K1 906 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 PPARGC1AQ9UBK2 798 aaKnown RBP11.17□□□□□ -0.62
PVT1-216ENST00000523068 VPS51Q9UID3 782 aa11.17□□□□□ -0.62
PVT1-216ENST00000523068 TBC1D3DA0A087WVF3 549 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 TBC1D3IA0A087WXS9 549 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 TBC1D3EA0A087X179 549 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 TBC1D3KA0A087X1G2 549 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 ILVBLA1L0T0 632 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 ANKRD62A6NC57 917 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 TBC1D3FA6NER0 549 aaPredicted RBP11.16□□□□□ -0.62
PVT1-216ENST00000523068 C2CD4BA6NLJ0 364 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 TBC1D3LB9A6J9 549 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 VILLO15195 856 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 FLRT2O43155 660 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 TBC1D3HP0C7X1 549 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 KRT3P12035 628 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 SRCP12931 536 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 CD38P28907 300 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 DRD3P35462 400 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 NUDT1P36639 197 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 PTPN9P43378 593 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 BNC1Q01954 994 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 NRG1Q02297 640 aaPredicted RBP11.16□□□□□ -0.62
PVT1-216ENST00000523068 NCAPHQ15003 741 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 ST3GAL2Q16842 350 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 CDO1Q16878 200 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 CLEC16AQ2KHT3 1053 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 SLC45A4Q5BKX6 768 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 TBC1D3GQ6DHY5 549 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 TBC1D3CQ6IPX1 549 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 RETSATQ6NUM9 610 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 PPP1R2P3Q6NXS1 205 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.16□□□□□ -0.62
PVT1-216ENST00000523068 Q6ZVU0 165 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 TFAP2DQ7Z6R9 452 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 PRPF39Q86UA1 669 aaKnown RBP11.16□□□□□ -0.62
PVT1-216ENST00000523068 TBC1D3Q8IZP1 549 aaPredicted RBP11.16□□□□□ -0.62
PVT1-216ENST00000523068 PIP4K2CQ8TBX8 421 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 RXFP2Q8WXD0 754 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 CAMK1GQ96NX5 476 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 PSMB7Q99436 277 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 ORAI3Q9BRQ5 295 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 SELENOOQ9BVL4 669 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 SCNM1Q9BWG6 230 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 IL21RQ9HBE5 538 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 SEPT11Q9NVA2 429 aaKnown RBP11.16□□□□□ -0.62
PVT1-216ENST00000523068 OR12D3Q9UGF7 316 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 PPM1HQ9ULR3 514 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 WASF3Q9UPY6 502 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 FNDC3AQ9Y2H6 1198 aaKnown RBP11.16□□□□□ -0.62
PVT1-216ENST00000523068 SNX11Q9Y5W9 270 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 SNX10Q9Y5X0 201 aa11.16□□□□□ -0.62
PVT1-216ENST00000523068 A0A0D9SEW6 157 aa11.15□□□□□ -0.62
PVT1-216ENST00000523068 CXorf51AA0A1B0GTR3 108 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms