RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 LIPCP11150 499 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 GRNP28799 593 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 PSMD8P48556 350 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 IRX6P78412 446 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 TRIP4Q15650 581 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 MPPE1Q53F39 396 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 MANEAQ5SRI9 462 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 PRPF39Q86UA1 669 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 WDR49Q8IV35 697 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 SRRM1Q8IYB3 904 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 CRYBG2Q8N1P7 616 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 STK40Q8N2I9 435 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 GPD1LQ8N335 351 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 OR13H1Q8NG92 308 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 NOC3LQ8WTT2 800 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 PTPRN2Q92932 1015 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 JAKMIP2Q96AA8 810 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 CDK5RAP3Q96JB5 506 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 ACCSQ96QU6 501 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 DCLK3Q9C098 648 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 CLIC5Q9NZA1 410 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 SERTAD1Q9UHV2 236 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 SLCO3A1Q9UIG8 710 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 RASAL2Q9UJF2 1139 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 TUBD1Q9UJT1 453 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 STOML2Q9UJZ1 356 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 TPX2Q9ULW0 747 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 NOL7Q9UMY1 257 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 DMTF1Q9Y222 760 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 USP3Q9Y6I4 520 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 NIPBLQ6KC79 2804 aaeCLIP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 MED13LQ71F56 2210 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 SLC12A8A0AV02 714 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 VPS37CA5D8V6 355 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 WIPF3A6NGB9 483 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 PRAMEF26H0Y7S4 382 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 NVLO15381 856 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 PLRG1O43660 514 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 PRPF6O94906 941 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 STAU1O95793 577 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 KRT18P05783 430 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 VAV1P15498 845 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 POLR2EP19388 210 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 C5AR1P21730 350 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 HOXD13P35453 343 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 CSKP41240 450 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 MLLT10P55197 1068 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 TAS2R38P59533 333 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 TNNC1P63316 161 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 GNL2Q13823 731 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 BMT2Q1RMZ1 405 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 HS1BP3Q53T59 392 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 BORAQ6PGQ7 559 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 SV2AQ7L0J3 742 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 RAB11FIP2Q7L804 512 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 CCDC186Q7Z3E2 898 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 TRIM69Q86WT6 500 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 JAMLQ86YT9 394 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 FBXO39Q8N4B4 442 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 TPCN2Q8NHX9 752 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 SSC4DQ8WTU2 575 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 DNAJC19Q96DA6 116 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 TMA16Q96EY4 203 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 MYEOVQ96EZ4 313 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 MYOCQ99972 504 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 DUSP23Q9BVJ7 150 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 MRPL44Q9H9J2 332 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 GPR27Q9NS67 375 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 FAM49BQ9NUQ9 324 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 FOXJ2Q9P0K8 574 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 MARCH2Q9P0N8 246 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 SARDHQ9UL12 918 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 R3HCC1Q9Y3T6 440 aaKnown RBP9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 ATP8B3O60423 1300 aa9.19□□□□□ -0.94
TRAPPC9-212ENST00000521944 AKAP9Q99996 3911 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 PRAMEF33A0A0G2JMD5 474 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 TARSL2A2RTX5 802 aaKnown RBP9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 A6NJY4 79 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 ZNF233A6NK53 670 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 CDK2AP1O14519 115 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 SLC31A1O15431 190 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 PRAMEF10O60809 474 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 RNASEH1O60930 286 aaKnown RBP9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 AGFG2O95081 481 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 CLDN1O95832 211 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 KRT7P08729 469 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 ALPPL2P10696 532 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 PRLRP16471 622 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 MZF1P28698 734 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 ETV5P41161 510 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 CLDN2P57739 230 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 AGBL4Q5VU57 503 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 C1QL3Q5VWW1 255 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 CAPRIN2Q6IMN6 1127 aaKnown RBP9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 ZCCHC8Q6NZY4 707 aaKnown RBP9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 MMS22LQ6ZRQ5 1243 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 ZNF548Q8NEK5 533 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 KLK6Q92876 244 aa9.18□□□□□ -0.94
TRAPPC9-212ENST00000521944 TNIP3Q96KP6 325 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms