RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TKTL2Q9H0I9 626 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 KDM4CQ9H3R0 1056 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TMPRSS4Q9NRS4 437 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 SLC25A13Q9UJS0 675 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 VPS28Q9UK41 221 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 TPX2Q9ULW0 747 aaKnown RBP12.78□□□□□ -0.36
CSMD1-205ENST00000519623 SNX10Q9Y5X0 201 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 DOCK4Q8N1I0 1966 aa12.78□□□□□ -0.36
CSMD1-205ENST00000519623 ACACAQ13085 2346 aa12.77□□□□□ -0.36
CSMD1-205ENST00000519623 FREM2Q5SZK8 3169 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 SLC7A4O43246 635 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 PLRG1O43660 514 aaKnown RBP12.77□□□□□ -0.37
CSMD1-205ENST00000519623 RTN2O75298 545 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 F9P00740 461 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 UCHL3P15374 230 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 SULT1E1P49888 294 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 CNTN1Q12860 1018 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 SLC25A52Q3SY17 297 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 C2CD6Q53TS8 623 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 CT47A1Q5JQC4 288 aaPredicted RBP12.77□□□□□ -0.37
CSMD1-205ENST00000519623 TAF3Q5VWG9 929 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 FAM46CQ5VWP2 391 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 TRNP1Q6NT89 227 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 LRSAM1Q6UWE0 723 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 Q6ZVU0 165 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 BNIPLQ7Z465 357 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 NOP9Q86U38 636 aaKnown RBP12.77□□□□□ -0.37
CSMD1-205ENST00000519623 PROSER1Q86XN7 944 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 SAP25Q8TEE9 199 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 SKA1Q96BD8 255 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 SERAC1Q96JX3 654 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 TBCBQ99426 244 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 STK33Q9BYT3 514 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 PDCL3Q9H2J4 239 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 AASDHPPTQ9NRN7 309 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 TMEM59LQ9UK28 342 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 HS3ST2Q9Y278 367 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 APC2O95996 2303 aa12.77□□□□□ -0.37
CSMD1-205ENST00000519623 IGLV3-10A0A075B6K4 115 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 FAM170AA1A519 330 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 GOLGA8CPA6NN73 597 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 TLR4O00206 839 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 ALOX15BO15296 676 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 SNAP91O60641 907 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 SRCP12931 536 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 FLT3P36888 993 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 TAS2R38P59533 333 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 DEUP1Q05D60 604 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 FAM102AQ5T9C2 384 aaPredicted RBP12.76□□□□□ -0.37
CSMD1-205ENST00000519623 AGBL4Q5VU57 503 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 DSG4Q86SJ6 1040 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 SETD3Q86TU7 594 aaPredicted RBP12.76□□□□□ -0.37
CSMD1-205ENST00000519623 PRPF39Q86UA1 669 aaKnown RBP12.76□□□□□ -0.37
CSMD1-205ENST00000519623 MARCH9Q86YJ5 346 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 GATAD2AQ86YP4 633 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 PIP4K2CQ8TBX8 421 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 CPA5Q8WXQ8 436 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 MUC3BQ9H195 1237 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 NUP62CLQ9H1M0 184 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 TMEM51Q9NW97 253 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 MPP6Q9NZW5 540 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 DACH1Q9UI36 760 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 STAP1Q9ULZ2 295 aa12.76□□□□□ -0.37
CSMD1-205ENST00000519623 A0A0D9SEW6 157 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 F8VZ95 297 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 K7ERQ8 282 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 RNF103O00237 685 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 PES1O00541 588 aaKnown RBP12.75□□□□□ -0.37
CSMD1-205ENST00000519623 SMAD6O43541 496 aaKnown RBP12.75□□□□□ -0.37
CSMD1-205ENST00000519623 ENDOD1O94919 500 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 LSM8O95777 96 aaKnown RBP12.75□□□□□ -0.37
CSMD1-205ENST00000519623 CTSLP07711 333 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 RHOCP08134 193 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 MMEP08473 750 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 ZNF18P17022 549 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 EEF1GP26641 437 aaKnown RBP12.75□□□□□ -0.37
CSMD1-205ENST00000519623 MAT2AP31153 395 aaKnown RBP12.75□□□□□ -0.37
CSMD1-205ENST00000519623 RXRGP48443 463 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 NXPH1P58417 271 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 NOMO3P69849 1222 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 KRT83P78385 493 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 SMAD1Q15797 465 aaKnown RBP12.75□□□□□ -0.37
CSMD1-205ENST00000519623 POM121L1PQ3SYA9 428 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 ACBD5Q5T8D3 534 aaPredicted RBP12.75□□□□□ -0.37
CSMD1-205ENST00000519623 NAPEPLDQ6IQ20 393 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 ARCQ7LC44 396 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 TRIM69Q86WT6 500 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 SPATS2Q86XZ4 545 aaKnown RBP12.75□□□□□ -0.37
CSMD1-205ENST00000519623 MFSD2AQ8NA29 543 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 OR2A12Q8NGT7 310 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 ENOX1Q8TC92 643 aaKnown RBP12.75□□□□□ -0.37
CSMD1-205ENST00000519623 EPS8L1Q8TE68 723 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 HAPLN3Q96S86 360 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 C2orf49Q9BVC5 232 aaPredicted RBP12.75□□□□□ -0.37
CSMD1-205ENST00000519623 ERVMER34-1Q9H9K5 563 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 GDF3Q9NR23 364 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 LMBRD1Q9NUN5 540 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 ZNF212Q9UDV6 495 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms