RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 MEI4A8MW99 385 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 UPK3BL1B0FP48 263 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 UPK3BL2E5RIL1 263 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 RNF103O00237 685 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 PLK4O00444 970 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 MCF2LO15068 1137 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 ZNF821O75541 412 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-215ENST00000519474 ZMPSTE24O75844 475 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 FSBPO95073 299 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 IL1BP01584 269 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 CALB1P05937 261 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 IGHV4-34P06331 123 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 RHOCP08134 193 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 CCDC172P0C7W6 258 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 SRCP12931 536 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 GOT1P17174 413 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 GPD1P21695 349 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 C5AR1P21730 350 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 GLDCP23378 1020 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 OR1E1P30953 314 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 SDC4P31431 198 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 DRD3P35462 400 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 NSFP46459 744 aaKnown RBP9.58□□□□□ -0.88
HDAC3-215ENST00000519474 METAP1P53582 386 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 ATXN3P54252 364 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-215ENST00000519474 KRT83P78385 493 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 NRG1Q02297 640 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-215ENST00000519474 C1QBPQ07021 282 aaKnown RBP9.58□□□□□ -0.88
HDAC3-215ENST00000519474 PPP1R15BQ5SWA1 713 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 MANEALQ5VSG8 457 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 KIAA0895LQ68EN5 471 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 PSAPL1Q6NUJ1 521 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 NCEH1Q6PIU2 408 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-215ENST00000519474 DBX2Q6ZNG2 339 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 ZNF571Q7Z3V5 609 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-215ENST00000519474 TFAP2DQ7Z6R9 452 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 DNAAF5Q86Y56 855 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 MINDY1Q8N5J2 469 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 C3orf20Q8ND61 904 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 GANCQ8TET4 914 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 FAM131CQ96AQ9 280 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 VCPIP1Q96JH7 1222 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 OMDQ99983 421 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 SELENOOQ9BVL4 669 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 EDEM3Q9BZQ6 932 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 ZYG11BQ9C0D3 744 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 MUC3BQ9H195 1237 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 HAUS4Q9H6D7 363 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 OSGEPQ9NPF4 335 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 NDFIP2Q9NV92 336 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 GEMIN8Q9NWZ8 242 aaKnown RBP9.58□□□□□ -0.88
HDAC3-215ENST00000519474 VPS51Q9UID3 782 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 VPS28Q9UK41 221 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 HS3ST2Q9Y278 367 aa9.58□□□□□ -0.88
HDAC3-215ENST00000519474 ASCC3Q8N3C0 2202 aaKnown RBP9.58□□□□□ -0.88
HDAC3-215ENST00000519474 A0A1B0GVT2 93 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 A0A1W2PPC4 97 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 LRRC53A6NM62 1247 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 KCNK3O14649 394 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 OPHN1O60890 802 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 RNASEH2AO75792 299 aaKnown RBP9.57□□□□□ -0.88
HDAC3-215ENST00000519474 CD160O95971 181 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 PLEKP08567 350 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-215ENST00000519474 SKILP12757 684 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 RRM1P23921 792 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 CD27P26842 260 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 PMLP29590 882 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 PBX1P40424 430 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 PRKCIP41743 596 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 NOVA1P51513 510 aaKnown RBP9.57□□□□□ -0.88
HDAC3-215ENST00000519474 ZNF143P52747 638 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-215ENST00000519474 FANCCQ00597 558 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 OGDHQ02218 1023 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 SFSWAPQ12872 951 aaKnown RBP9.57□□□□□ -0.88
HDAC3-215ENST00000519474 ELAVL3Q14576 367 aaKnown RBP9.57□□□□□ -0.88
HDAC3-215ENST00000519474 ARL13BQ3SXY8 428 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 TTC31Q49AM3 519 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-215ENST00000519474 KCNT1Q5JUK3 1230 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 E4F1Q66K89 784 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-215ENST00000519474 LINGO4Q6UY18 593 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 Q6ZVU0 165 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 LUZP1Q86V48 1076 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 NLRP14Q86W24 1093 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 PYROXD2Q8N2H3 581 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 ZCCHC9Q8N567 271 aaKnown RBP9.57□□□□□ -0.88
HDAC3-215ENST00000519474 ARFGAP1Q8N6T3 406 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 CCDC185Q8N715 623 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 ATP11CQ8NB49 1132 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 DEFB124Q8NES8 71 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 OR2A12Q8NGT7 310 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 OR14C36Q8NHC7 312 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 FAM172AQ8WUF8 416 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 SPON2Q9BUD6 331 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 ACE2Q9BYF1 805 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-215ENST00000519474 ZDHHC5Q9C0B5 715 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 TTYH3Q9C0H2 523 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 RETREG1Q9H6L5 497 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 IL21RQ9HBE5 538 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 TM9SF3Q9HD45 589 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms