RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 GRK7Q8WTQ7 553 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 FAM172AQ8WUF8 416 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 SORCS1Q8WY21 1168 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 KRT35Q92764 455 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 ACDQ96AP0 544 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 FAF2Q96CS3 445 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 FAM122AQ96E09 287 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 BTN2A3PQ96KV6 586 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 ACOX2Q99424 681 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 DDX50Q9BQ39 737 aaKnown RBP7.8□□□□□ -1.16
SDCBP-206ENST00000519115 OSBPL8Q9BZF1 889 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 TRIM7Q9C029 511 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 CIPCQ9C0C6 399 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 BRD8Q9H0E9 1235 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 SIK2Q9H0K1 926 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 TSPYL1Q9H0U9 437 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 ANLNQ9NQW6 1124 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 ABCB8Q9NUT2 735 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 FBXO10Q9UK96 956 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 HCN2Q9UL51 889 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 MMP17Q9ULZ9 603 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 SLC8A2Q9UPR5 921 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 ARIH1Q9Y4X5 557 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-206ENST00000519115 SNX10Q9Y5X0 201 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 GON4LQ3T8J9 2241 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 OTOGLQ3ZCN5 2332 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 PIEZO1Q92508 2521 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 NUP205Q92621 2012 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 NUMA1Q14980 2115 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CHD5Q8TDI0 1954 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 EP300Q09472 2414 aaPredicted RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 A0A0A0MRY4 1105 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 TYW5A2RUC4 315 aaKnown RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CCDC151A5D8V7 595 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 C3orf70A6NLC5 250 aaPredicted RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 SMAPO00193 183 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 ZNF185O15231 689 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 PAPSS2O95340 614 aaPredicted RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 RARAP10276 462 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 PABPC1P11940 636 aaKnown RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 HLA-FP30511 346 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CXCR5P32302 372 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CD70P32970 193 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 ADRA1BP35368 520 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 HDAC4P56524 1084 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 TAS2R40P59535 323 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CBLBQ13191 982 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 SRSF5Q13243 272 aaKnown RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 XRCC4Q13426 336 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CUL1Q13616 776 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CDH18Q13634 790 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 AUHQ13825 339 aaKnown RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 ZNF528Q3MIS6 628 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 TMEM215Q68D42 235 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 ANO7Q6IWH7 933 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 TMEM92Q6UXU6 159 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 NUDT18Q6ZVK8 323 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CHST9Q7L1S5 443 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 SYT13Q7L8C5 426 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 C14orf80Q86SX3 495 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 MFN1Q8IWA4 741 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CHPFQ8IZ52 775 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CARNMT1Q8N4J0 409 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 TSTD1Q8NFU3 115 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CYB5D2Q8WUJ1 264 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 TSC1Q92574 1164 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 NKD2Q969F2 451 aaPredicted RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 BTBD6Q96KE9 485 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 RPRD1AQ96P16 312 aaPredicted RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 PRMT1Q99873 361 aaKnown RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 MAK16Q9BXY0 300 aaKnown RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 SLC2A11Q9BYW1 496 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 TKTL2Q9H0I9 626 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 IRF2BPLQ9H1B7 796 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 WDCPQ9H6R7 721 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 ARGLU1Q9NWB6 273 aaPredicted RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 ZSCAN32Q9NX65 697 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 CACNA2D2Q9NY47 1150 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 SLC12A6Q9UHW9 1150 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 GGA2Q9UJY4 613 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 VANGL2Q9ULK5 521 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 PACSIN2Q9UNF0 486 aaPredicted RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 SLC27A6Q9Y2P4 619 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 HS3ST4Q9Y661 456 aa7.79□□□□□ -1.16
SDCBP-206ENST00000519115 ZFHX2Q9C0A1 2572 aaPredicted RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 PTPRZ1P23471 2315 aaPredicted RBP7.79□□□□□ -1.16
SDCBP-206ENST00000519115 hCG_1818297A0A087WSY0 165 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 UQCRHLA0A096LP55 91 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 CFAP69A5D8W1 941 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 WASH3PC4AMC7 463 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 APOC4-APOC2K7ER74 178 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 PHF2O75151 1096 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 ERLIN1O75477 346 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 LUC7L3O95232 432 aaKnown RBP7.78□□□□□ -1.16
SDCBP-206ENST00000519115 APBB3O95704 486 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 APOC2P02655 101 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 ITGAVP06756 1048 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 UQCRHP07919 91 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 HOXB2P14652 356 aa7.78□□□□□ -1.16
SDCBP-206ENST00000519115 TGM2P21980 687 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms