RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 KCNK4Q9NYG8 393 aa10.15□□□□□ -0.79
SH2D4A-202ENST00000518040 PCDHB11Q9Y5F2 797 aa10.15□□□□□ -0.79
SH2D4A-202ENST00000518040 HS3ST3A1Q9Y663 406 aa10.15□□□□□ -0.79
SH2D4A-202ENST00000518040 COL27A1Q8IZC6 1860 aaPredicted RBP10.15□□□□□ -0.79
SH2D4A-202ENST00000518040 USP9YO00507 2555 aaPredicted RBP10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 NYNRINQ9P2P1 1898 aaKnown RBP10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 SLC31A1O15431 190 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 LUC7L3O95232 432 aaKnown RBP10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 HLA-DRAP01903 254 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 CSF2P04141 144 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 NME1P15531 152 aaKnown RBP10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 CD58P19256 250 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 SLC6A4P31645 630 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 CTSOP43234 321 aaPredicted RBP10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 CNTN1Q12860 1018 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 ARHGAP17Q68EM7 881 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 RAB11FIP2Q7L804 512 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 PARGQ86W56 976 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 HORMAD1Q86X24 394 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 JAMLQ86YT9 394 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 SLC9A9Q8IVB4 645 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 SCML4Q8N228 414 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 ANKK1Q8NFD2 765 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 KCTD13Q8WZ19 329 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 CLIC6Q96NY7 704 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 PANK2Q9BZ23 570 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 RTN4Q9NQC3 1192 aaKnown RBP10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 KIAA1468Q9P260 1216 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 CA5BQ9Y2D0 317 aa10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 MORC2Q9Y6X9 1032 aaPredicted RBP10.14□□□□□ -0.79
SH2D4A-202ENST00000518040 CREBBPQ92793 2442 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 GOLGA6L7A0A1B0GV03 622 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 BLACEA4D250 179 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 XPO1O14980 1071 aaKnown RBP10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 MCF2LO15068 1137 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 AQP9O43315 295 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 MSI1O43347 362 aaKnown RBP10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 NEBLO76041 1014 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 OXCT1P55809 520 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 NCAPHQ15003 741 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 BHLHA9Q7RTU4 235 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 SIX6OS1Q8N1H7 587 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 BTN2A2Q8WVV5 523 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 EDEM1Q92611 657 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 TMEM159Q96B96 161 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 RPL10LQ96L21 214 aaKnown RBP10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 CNGB3Q9NQW8 809 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 PPM1HQ9ULR3 514 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 CLIC4Q9Y696 253 aa10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 TDRD6O60522 2096 aaKnown RBP10.13□□□□□ -0.79
SH2D4A-202ENST00000518040 SPTY2D1-AS1A0A0U1RR47 76 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 A0A1W2PQU0 124 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 PMS2P1A4D2B8 440 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 JMJD7P0C870 316 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 PRLRP16471 622 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 ZNF18P17022 549 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 CD82P27701 267 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 UGT1A5P35504 534 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 TBX4P57082 545 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 RPS24P62847 133 aaKnown RBP10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 TGIF1Q15583 401 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 ZNF284Q2VY69 593 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 ZNF394Q53GI3 561 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 FSCBQ5H9T9 825 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 MS4A13Q5J8X5 152 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 BORAQ6PGQ7 559 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 Q6ZSR6 202 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 UNC13DQ70J99 1090 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 ZSCAN30Q86W11 494 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 SLC22A18ASQ8N1D0 253 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 PDILTQ8N807 584 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 ERCC4Q92889 916 aaPredicted RBP10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 PRICKLE1Q96MT3 831 aaPredicted RBP10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 TMEM74Q96NL1 305 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 MYOCQ99972 504 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 BOCQ9BWV1 1114 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 GPR27Q9NS67 375 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 HESX1Q9UBX0 185 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 SMC3Q9UQE7 1217 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 NBPF19A0A087WUL8 3843 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 TEP1Q99973 2627 aaKnown RBP10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 A0A087X0B3 334 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 YJEFN3A6XGL0 299 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 E7ENQ6 273 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 NTN3O00634 580 aaPredicted RBP10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 MUSKO15146 869 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 RABIFP47224 123 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 PDX1P52945 283 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 DLG4P78352 724 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 NUCB2P80303 420 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 ADIGQ0VDE8 80 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 BST2Q10589 180 aaKnown RBP10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 NNTQ13423 1086 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 ESRP1Q6NXG1 681 aaKnown RBP10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 KYAT3Q6YP21 454 aaKnown RBP10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 GCNT7Q6ZNI0 430 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 MMS22LQ6ZRQ5 1243 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 PTAR1Q7Z6K3 402 aaPredicted RBP10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 ATCAYQ86WG3 371 aa10.12□□□□□ -0.79
SH2D4A-202ENST00000518040 PTRH1Q86Y79 214 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms