RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 PIK3CD-AS1Q5SR53 167 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 TTC39AQ5SRH9 613 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 HYIQ5T013 277 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 TBC1D3GQ6DHY5 549 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 TBC1D3CQ6IPX1 549 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 KLHL17Q6TDP4 642 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 ADGRF4Q8IZF3 695 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 TBC1D3Q8IZP1 549 aaPredicted RBP3.57□□□□□ -1.84
HERC4-215ENST00000515753 ATG16L2Q8NAA4 619 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 TDRD9Q8NDG6 1382 aaKnown RBP3.57□□□□□ -1.84
HERC4-215ENST00000515753 IL17REQ8NFR9 667 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 SCAMP5Q8TAC9 235 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 SKA1Q96BD8 255 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 LMTK3Q96Q04 1460 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 MAGEH1Q9H213 219 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 SLCO5A1Q9H2Y9 848 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 ABHD16BQ9H3Z7 469 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 SPAG4Q9NPE6 437 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 G6PC2Q9NQR9 355 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 DECR2Q9NUI1 292 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 DTX4Q9Y2E6 619 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 PKP3Q9Y446 797 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 RPS6KL1Q9Y6S9 549 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 GRIN2BQ13224 1484 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 IGLV5-39A0A0G2JS06 123 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.56□□□□□ -1.84
HERC4-215ENST00000515753 GAGE12JA6NER3 117 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 C4orf47A7E2U8 309 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 FOXO6A8MYZ6 492 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 HNRNPRO43390 633 aaKnown RBP3.56□□□□□ -1.84
HERC4-215ENST00000515753 UGDHO60701 494 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 NEURL1O76050 574 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 HEXIM1O94992 359 aaKnown RBP3.56□□□□□ -1.84
HERC4-215ENST00000515753 IFNA2P01563 188 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 SERPINA4P29622 427 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 GEMIN4P57678 1058 aaKnown RBP3.56□□□□□ -1.84
HERC4-215ENST00000515753 RHAGQ02094 409 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 PPFIA1Q13136 1202 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 DDX10Q13206 875 aaKnown RBP3.56□□□□□ -1.84
HERC4-215ENST00000515753 SMTNL2Q2TAL5 461 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 SLC4A8Q2Y0W8 1093 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 GALNTL6Q49A17 601 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 C10orf76Q5T2E6 689 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 CCDC174Q6PII3 467 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 KDELC2Q7Z4H8 507 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 ANKRD18AQ8IVF6 992 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 DCP1BQ8IZD4 617 aaKnown RBP3.56□□□□□ -1.84
HERC4-215ENST00000515753 TMTC2Q8N394 836 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 NAXEQ8NCW5 288 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 ASB5Q8WWX0 329 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 SLC25A28Q96A46 364 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 SDCCAG3Q96C92 435 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 TWSG1Q9GZX9 223 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 TASP1Q9H6P5 420 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 RNF146Q9NTX7 359 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 SAGE1Q9NXZ1 904 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 MDFICQ9P1T7 246 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 FBXO2Q9UK22 296 aaPredicted RBP3.56□□□□□ -1.84
HERC4-215ENST00000515753 SLC8A2Q9UPR5 921 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 ICKQ9UPZ9 632 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 LAMP3Q9UQV4 416 aa3.56□□□□□ -1.84
HERC4-215ENST00000515753 LRRFIP2Q9Y608 721 aaKnown RBP3.56□□□□□ -1.84
HERC4-215ENST00000515753 DNMBPQ6XZF7 1577 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 POLA1P09884 1462 aaPredicted RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 MAGI1Q96QZ7 1491 aaPredicted RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 TRIP12Q14669 1992 aaPredicted RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 DPPA5A6NC42 116 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 FAM90A20PA6NIJ5 464 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 LACTBL1A8MY62 500 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 RHODO00212 210 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 MDM4O15151 490 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 EPB41L2O43491 1005 aaKnown RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 FAM155BO75949 473 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 TFRCP02786 760 aaKnown RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 LDHCP07864 332 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 GYS1P13807 737 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 PLA2G2AP14555 144 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 PCP4P48539 62 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 SMAD1Q15797 465 aaKnown RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 CCDC38Q502W7 563 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 ZNF628Q5EBL2 1059 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 C6orf10Q5SRN2 563 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 SULT6B1Q6IMI4 303 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 C18orf65Q6ZTR6 163 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 RFX8Q6ZV50 586 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 TRAPPC11Q7Z392 1133 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 PTGR2Q8N8N7 351 aaPredicted RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 CLEC4CQ8WTT0 213 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 SNRNP27Q8WVK2 155 aaKnown RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 TRAPPC12Q8WVT3 735 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 THAP4Q8WY91 577 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 LTV1Q96GA3 475 aaPredicted RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 PPM1MQ96MI6 270 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 NLRP4Q96MN2 994 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 PIGSQ96S52 555 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 SORBS1Q9BX66 1292 aaKnown RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 OSBPL5Q9H0X9 879 aaPredicted RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 ELAC1Q9H777 363 aaKnown RBP3.55□□□□□ -1.84
HERC4-215ENST00000515753 FZD3Q9NPG1 666 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 LRFN1Q9P244 771 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms