RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ZNF143P52747 638 aaPredicted RBP11.78□□□□□ -0.52
VCAN-212ENST00000515397 GALCP54803 685 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 OXCT1P55809 520 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 GFPT1Q06210 699 aaPredicted RBP11.78□□□□□ -0.52
VCAN-212ENST00000515397 MTA1Q13330 715 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 ARL13BQ3SXY8 428 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 WDR45BQ5MNZ6 344 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 DAB2IPQ5VWQ8 1189 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 HGSNATQ68CP4 663 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 SLC23A3Q6PIS1 610 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 STRADAQ7RTN6 431 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 SLFN11Q7Z7L1 901 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 SH2D3CQ8N5H7 860 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 CHST14Q8NCH0 376 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 OMDQ99983 421 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 XPO4Q9C0E2 1151 aaKnown RBP11.78□□□□□ -0.52
VCAN-212ENST00000515397 OSBPL2Q9H1P3 480 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 TMEM9BQ9NQ34 198 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 ZNF212Q9UDV6 495 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 SLC25A13Q9UJS0 675 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 NCKAP1Q9Y2A7 1128 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 ITIH6Q6UXX5 1313 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 CEP192Q8TEP8 1941 aa11.78□□□□□ -0.52
VCAN-212ENST00000515397 MUC22E2RYF6 1773 aaPredicted RBP11.77□□□□□ -0.52
VCAN-212ENST00000515397 ANKRD62A6NC57 917 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 ATP9BO43861 1147 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 CREB3O43889 395 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 FOXD2O60548 495 aaPredicted RBP11.77□□□□□ -0.53
VCAN-212ENST00000515397 RTN2O75298 545 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 PSMA2P25787 234 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 PRKCIP41743 596 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 CSNK1EP49674 416 aaKnown RBP11.77□□□□□ -0.53
VCAN-212ENST00000515397 DNA2P51530 1060 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 GSCP56915 257 aaPredicted RBP11.77□□□□□ -0.53
VCAN-212ENST00000515397 KRT83P78385 493 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 ARID5BQ14865 1188 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 NFKBIBQ15653 356 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 TTC31Q49AM3 519 aaPredicted RBP11.77□□□□□ -0.53
VCAN-212ENST00000515397 TDRD12Q587J7 1177 aaKnown RBP11.77□□□□□ -0.53
VCAN-212ENST00000515397 C6orf118Q5T5N4 469 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 MANEALQ5VSG8 457 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 PEAR1Q5VY43 1037 aaPredicted RBP11.77□□□□□ -0.53
VCAN-212ENST00000515397 NCEH1Q6PIU2 408 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 LRSAM1Q6UWE0 723 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 ERMP1Q7Z2K6 904 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 TMC6Q7Z403 805 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 SETD3Q86TU7 594 aaPredicted RBP11.77□□□□□ -0.53
VCAN-212ENST00000515397 ARFGAP1Q8N6T3 406 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 KDM1BQ8NB78 822 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 CADM4Q8NFZ8 388 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 OR14C36Q8NHC7 312 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 DNASE2BQ8WZ79 361 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 BIRC7Q96CA5 298 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 PPP1R9BQ96SB3 815 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 CNPY3Q9BT09 278 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 EBF2Q9HAK2 575 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 CAPN10Q9HC96 672 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 ATP13A1Q9HD20 1204 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 CNOT8Q9UFF9 292 aaKnown RBP11.77□□□□□ -0.53
VCAN-212ENST00000515397 ADAMTS1Q9UHI8 967 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 EVLQ9UI08 416 aaPredicted RBP11.77□□□□□ -0.53
VCAN-212ENST00000515397 FZD10Q9ULW2 581 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 NEU3Q9UQ49 428 aa11.77□□□□□ -0.53
VCAN-212ENST00000515397 FCF1Q9Y324 198 aaKnown RBP11.77□□□□□ -0.53
VCAN-212ENST00000515397 ADAMTS9Q9P2N4 1935 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 A0A1B0GVT2 93 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 ILVBLA1L0T0 632 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 ARHGAP33O14559 1287 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 WNT9AO14904 365 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 ZMPSTE24O75844 475 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 GYPCP04921 128 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 CTSLP07711 333 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 CASP14P31944 242 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 DRD3P35462 400 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 LIMK1P53667 647 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 ATXN3P54252 364 aaPredicted RBP11.76□□□□□ -0.53
VCAN-212ENST00000515397 BNC1Q01954 994 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 GNA12Q03113 381 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 ZBTB16Q05516 673 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 ZNF252P-AS1Q0IIN9 211 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 CA9Q16790 459 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 PRAMEF14Q5SWL7 426 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 PLEKHA7Q6IQ23 1121 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 NLRP14Q86W24 1093 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 MINDY1Q8N5J2 469 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 CEP76Q8TAP6 659 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 PIP4K2CQ8TBX8 421 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 OR8D1Q8WZ84 308 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 ZNF653Q96CK0 615 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 TBC1D31Q96DN5 1066 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 BTBD6Q96KE9 485 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 PEBP4Q96S96 227 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 C2orf49Q9BVC5 232 aaPredicted RBP11.76□□□□□ -0.53
VCAN-212ENST00000515397 EDEM3Q9BZQ6 932 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 KLC2Q9H0B6 622 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 TSPY26PQ9H489 355 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 FBRSQ9HAH7 460 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 IL21RQ9HBE5 538 aa11.76□□□□□ -0.53
VCAN-212ENST00000515397 SGK2Q9HBY8 427 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms