RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PECAM1P16284 738 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 MZF1P28698 734 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 CSKP41240 450 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 PAFAH1B1P43034 410 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 TNFRSF4P43489 277 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 SLC6A11P48066 632 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 PAPOLAP51003 745 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 GEMIN4P57678 1058 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 OTUD4Q01804 1114 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 IL10RBQ08334 325 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 SLC20A2Q08357 652 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 PRKD1Q15139 912 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 FUT11Q495W5 492 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 SLC44A4Q53GD3 710 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 TMEM196Q5HYL7 178 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 PITRM1Q5JRX3 1037 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 TIGD7Q6NT04 549 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 METTL3Q86U44 580 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 ADIPOR2Q86V24 386 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 KCNV2Q8TDN2 545 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 CASKIN2Q8WXE0 1202 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 HMCESQ96FZ2 354 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 MS4A14Q96JA4 679 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 P2RY13Q9BPV8 354 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 C2orf49Q9BVC5 232 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 PDFQ9HBH1 243 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 HEBP1Q9NRV9 189 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 HEY1Q9Y5J3 304 aa12.25□□□□□ -0.45
PDLIM5-220ENST00000514830 TRIOO75962 3097 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 GOLGA6L10A0A0M3HER8 536 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 BCLAF3A2AJT9 711 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 CCDC188H7C350 402 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 MTSS1O43312 755 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 LIASO43766 372 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 PRAMEF11O60813 436 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 URI1O94763 535 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 KAT7O95251 611 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 APODP05090 189 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 ACVRL1P37023 503 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 GALK1P51570 392 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 STARD6P59095 220 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 DYNLT1P63172 113 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 NHLH1Q02575 133 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 RFTN1Q14699 578 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 OASLQ15646 514 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 MLF2Q15773 248 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 INO80DQ53TQ3 878 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 SLC45A4Q5BKX6 768 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 CCDC181Q5TID7 509 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 NPNTQ6UXI9 565 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 ATPAF2Q8N5M1 289 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 NAT16Q8N8M0 369 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 PRELID2Q8N945 189 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 OR7D4Q8NG98 312 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 MAML1Q92585 1016 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 ZNF592Q92610 1267 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 HAUS1Q96CS2 278 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 CELF6Q96J87 481 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 QKIQ96PU8 341 aaKnown RBP eCLIP12.24□□□□□ -0.454e-24■■■■■ 117.3
PDLIM5-220ENST00000514830 MUC3BQ9H195 1237 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 IRF2BPLQ9H1B7 796 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 L2HGDHQ9H9P8 463 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 ATP13A1Q9HD20 1204 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 AMACRQ9UHK6 382 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 IPO11Q9UI26 975 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 VPS28Q9UK41 221 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 HPCAL4Q9UM19 191 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 HS3ST2Q9Y278 367 aa12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 DRG1Q9Y295 367 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 R3HDM2Q9Y2K5 976 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-220ENST00000514830 MYO18AQ92614 2054 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 CKAP5Q14008 2032 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 CFAP69A5D8W1 941 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 DFFAO00273 331 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 PDE2AO00408 941 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 KRIT1O00522 736 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 MCF2LO15068 1137 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 MATN3O15232 486 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 PEX11BO96011 259 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 ATP5BP06576 529 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 ITGAVP06756 1048 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 SRPRAP08240 638 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 DLDP09622 509 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 RBP3P10745 1247 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 CHRM1P11229 460 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 HNRNPLP14866 589 aaKnown RBP eCLIP12.23□□□□□ -0.455e-8■■■□□ 14.7
PDLIM5-220ENST00000514830 POLR2EP19388 210 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 DRD1P21728 446 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 FNTAP49354 379 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 CLCN6P51797 869 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 EIF3EP60228 445 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 IFI35P80217 286 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 ARF5P84085 180 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 CKAP4Q07065 602 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 BYSLQ13895 437 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 HNRNPDQ14103 355 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 LLGL1Q15334 1064 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 GEN1Q17RS7 908 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 FBXO43Q4G163 708 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 TMEM215Q68D42 235 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms