RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 ADAM17P78536 824 aa14.33□□□□□ -0.11
CLOCK-211ENST00000513440 USP10Q14694 798 aaKnown RBP14.33□□□□□ -0.11
CLOCK-211ENST00000513440 TAF1CQ15572 869 aaPredicted RBP14.33□□□□□ -0.11
CLOCK-211ENST00000513440 NOMO2Q5JPE7 1267 aa14.33□□□□□ -0.11
CLOCK-211ENST00000513440 FAM219BQ5XKK7 198 aa14.33□□□□□ -0.11
CLOCK-211ENST00000513440 ZNF354CQ86Y25 554 aa14.33□□□□□ -0.11
CLOCK-211ENST00000513440 SLC41A1Q8IVJ1 513 aa14.33□□□□□ -0.11
CLOCK-211ENST00000513440 DENND6AQ8IWF6 608 aa14.33□□□□□ -0.11
CLOCK-211ENST00000513440 MAPK15Q8TD08 544 aa14.33□□□□□ -0.11
CLOCK-211ENST00000513440 KCTD13Q8WZ19 329 aa14.33□□□□□ -0.11
CLOCK-211ENST00000513440 VPS39Q96JC1 886 aa14.33□□□□□ -0.11
CLOCK-211ENST00000513440 OMDQ99983 421 aa14.33□□□□□ -0.11
CLOCK-211ENST00000513440 DPPA5A6NC42 116 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 TM7SF2O76062 418 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 MSX2P35548 267 aaPredicted RBP14.33□□□□□ -0.12
CLOCK-211ENST00000513440 PGFP49763 221 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 COPAP53621 1224 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 MPP1Q00013 466 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 TUBB3Q13509 450 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 BLMHQ13867 455 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 RNF135Q8IUD6 432 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 ACMSDQ8TDX5 336 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 SH3TC2Q8TF17 1288 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 DDX50Q9BQ39 737 aaKnown RBP14.33□□□□□ -0.12
CLOCK-211ENST00000513440 NAT9Q9BTE0 207 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 SOX13Q9UN79 622 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 PLA2G4CQ9UP65 541 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 SMNDC1O75940 238 aaKnown RBP eCLIP14.33□□□□□ -0.12
CLOCK-211ENST00000513440 VAPBO95292 243 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 GCKP35557 465 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 LIMK2P53671 638 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 PPIDQ08752 370 aaKnown RBP14.33□□□□□ -0.12
CLOCK-211ENST00000513440 XKR4Q5GH76 650 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 IL31Q6EBC2 164 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 ZNF280DQ6N043 979 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 CCNJLQ8IV13 435 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 DEFB107AQ8IZN7 70 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 CCNYL1Q8N7R7 359 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 C2orf69Q8N8R5 385 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 KCTD4Q8WVF5 259 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 FTHL17Q9BXU8 183 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 GBA3Q9H227 469 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 GTF2IRD1Q9UHL9 959 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 TLK1Q9UKI8 766 aa14.33□□□□□ -0.12
CLOCK-211ENST00000513440 ITGA7Q13683 1181 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 SCN4BQ8IWT1 228 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 TDRD5Q8NAT2 981 aaKnown RBP14.32□□□□□ -0.12
CLOCK-211ENST00000513440 OR52B2Q96RD2 323 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 FICDQ9BVA6 458 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 AGO3Q9H9G7 860 aaKnown RBP14.32□□□□□ -0.12
CLOCK-211ENST00000513440 NMRAL1Q9HBL8 299 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 CNGB3Q9NQW8 809 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 BATF3Q9NR55 127 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 NDFIP2Q9NV92 336 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 MPP6Q9NZW5 540 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 SLC2A6Q9UGQ3 507 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 ZSWIM8A7E2V4 1837 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 ANPEPP15144 967 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 LRPAP1P30533 357 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 DNAL1Q4LDG9 190 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 IZUMO2Q6UXV1 221 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 EP400NLQ6ZTU2 488 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 CNTD1Q8N815 330 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 SMARCD1Q96GM5 515 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 TTC24A2A3L6 582 aaPredicted RBP14.32□□□□□ -0.12
CLOCK-211ENST00000513440 AIM2O14862 343 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 FBXO21O94952 628 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 EPHA3P29320 983 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 CD52P31358 61 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 SERPINB6P35237 376 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 CHRNA4P43681 627 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 LHX1P48742 406 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 MRPS6P82932 125 aaKnown RBP14.32□□□□□ -0.12
CLOCK-211ENST00000513440 GDF6Q6KF10 455 aaPredicted RBP14.32□□□□□ -0.12
CLOCK-211ENST00000513440 ISLR2Q6UXK2 745 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 HPS6Q86YV9 775 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 DQX1Q8TE96 717 aaKnown RBP14.32□□□□□ -0.12
CLOCK-211ENST00000513440 NUF2Q9BZD4 464 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 NDE1Q9NXR1 346 aa14.32□□□□□ -0.12
CLOCK-211ENST00000513440 STX18Q9P2W9 335 aaKnown RBP14.32□□□□□ -0.12
CLOCK-211ENST00000513440 RUVBL2Q9Y230 463 aaKnown RBP14.32□□□□□ -0.12
CLOCK-211ENST00000513440 IQCA1LA6NCM1 817 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 ZBTB14O43829 449 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 ITGB1P05556 798 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 PURAQ00577 322 aaKnown RBP14.31□□□□□ -0.12
CLOCK-211ENST00000513440 KLC1Q07866 573 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 RABGAP1LQ5R372 815 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 PPM1LQ5SGD2 360 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 ITPRIPL1Q6GPH6 555 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 AGMOQ6ZNB7 445 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 FRMD7Q6ZUT3 714 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 RNF148Q8N7C7 305 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 RAB3IL1Q8TBN0 382 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 GATA5Q9BWX5 397 aaPredicted RBP14.31□□□□□ -0.12
CLOCK-211ENST00000513440 CASS4Q9NQ75 786 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 DICER1Q9UPY3 1922 aaKnown RBP14.31□□□□□ -0.12
CLOCK-211ENST00000513440 A0A088AWK7 358 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 CFLARO15519 480 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 MAGEC1O60732 1142 aa14.31□□□□□ -0.12
CLOCK-211ENST00000513440 ZCCHC18P0CG32 403 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms