RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 LGMNQ99538 433 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 SLC2A4RGQ9NR83 387 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 DEC1Q9P2X7 70 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 IPO11Q9UI26 975 aaKnown RBP12.82□□□□□ -0.36
PDPN-210ENST00000513143 GGA2Q9UJY4 613 aa12.82□□□□□ -0.36
PDPN-210ENST00000513143 INTS6Q9UL03 887 aaKnown RBP12.82□□□□□ -0.36
PDPN-210ENST00000513143 DRG1Q9Y295 367 aaKnown RBP12.82□□□□□ -0.36
PDPN-210ENST00000513143 CTAGE15A4D2H0 777 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.81□□□□□ -0.36
PDPN-210ENST00000513143 TRIM24O15164 1050 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 NARSO43776 548 aaKnown RBP12.81□□□□□ -0.36
PDPN-210ENST00000513143 PRAMEF11O60813 436 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 ITGAVP06756 1048 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 CTAGE8P0CG41 777 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 CCNCP24863 283 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 CHRNA3P32297 505 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 COILP38432 576 aaPredicted RBP12.81□□□□□ -0.36
PDPN-210ENST00000513143 FNTAP49354 379 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 PFKPQ01813 784 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 IL10RBQ08334 325 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 C2orf54Q08AI8 447 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 DMC1Q14565 340 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 PITRM1Q5JRX3 1037 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 GRAMD4Q6IC98 578 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 TIGD7Q6NT04 549 aaPredicted RBP12.81□□□□□ -0.36
PDPN-210ENST00000513143 TTC27Q6P3X3 843 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 DARS2Q6PI48 645 aaKnown RBP12.81□□□□□ -0.36
PDPN-210ENST00000513143 CTAGE6Q86UF2 777 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 ADIPOR2Q86V24 386 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 CDKL3Q8IVW4 592 aaPredicted RBP12.81□□□□□ -0.36
PDPN-210ENST00000513143 CTAGE4Q8IX94 777 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 CCDC13Q8IYE1 715 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 AHI1Q8N157 1196 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 PHTF2Q8N3S3 785 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 DCAF4L2Q8NA75 395 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 CCNYQ8ND76 341 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 WFIKKN2Q8TEU8 576 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 SPON2Q9BUD6 331 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 CARD6Q9BX69 1037 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 DDX47Q9H0S4 455 aaKnown RBP12.81□□□□□ -0.36
PDPN-210ENST00000513143 C8orf33Q9H7E9 229 aaPredicted RBP12.81□□□□□ -0.36
PDPN-210ENST00000513143 USP29Q9HBJ7 922 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 ATP13A1Q9HD20 1204 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 VPS28Q9UK41 221 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 HPCAL4Q9UM19 191 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 DUSP12Q9UNI6 340 aa12.81□□□□□ -0.36
PDPN-210ENST00000513143 F5P12259 2224 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 MYO18AQ92614 2054 aaKnown RBP12.8□□□□□ -0.36
PDPN-210ENST00000513143 CXorf51AA0A1B0GTR3 108 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 J3KR12 359 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 MATN3O15232 486 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 ZNF189O75820 626 aaPredicted RBP12.8□□□□□ -0.36
PDPN-210ENST00000513143 ZMPSTE24O75844 475 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 PEX11BO96011 259 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 GLULP15104 373 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 VAV1P15498 845 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 GLDCP23378 1020 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 RBL1P28749 1068 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 STIP1P31948 543 aaKnown RBP12.8□□□□□ -0.36
PDPN-210ENST00000513143 CTHP32929 405 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 KCNJ1P48048 391 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 SOX9P48436 509 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 AP1B1Q10567 949 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 GEN1Q17RS7 908 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 FUT11Q495W5 492 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 PREPLQ4J6C6 727 aaPredicted RBP12.8□□□□□ -0.36
PDPN-210ENST00000513143 NAIF1Q69YI7 327 aaPredicted RBP12.8□□□□□ -0.36
PDPN-210ENST00000513143 CCDC137Q6PK04 289 aaKnown RBP12.8□□□□□ -0.36
PDPN-210ENST00000513143 B4GALNT4Q76KP1 1039 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 RALGPS2Q86X27 583 aaPredicted RBP12.8□□□□□ -0.36
PDPN-210ENST00000513143 ZNF354CQ86Y25 554 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 ATL2Q8NHH9 583 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 LRRN4Q8WUT4 740 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 MAML1Q92585 1016 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 TTC17Q96AE7 1141 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 ACDQ96AP0 544 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 RUNDC3BQ96NL0 473 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 PNKPQ96T60 521 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 TMEM121Q9BTD3 319 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 C2orf49Q9BVC5 232 aaPredicted RBP12.8□□□□□ -0.36
PDPN-210ENST00000513143 C10orf88Q9H8K7 445 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 PDFQ9HBH1 243 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 PCYOX1Q9UHG3 505 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 VPS51Q9UID3 782 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 ZNF148Q9UQR1 794 aa12.8□□□□□ -0.36
PDPN-210ENST00000513143 A0A0A0MRY4 1105 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 CFAP69A5D8W1 941 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 ZSCAN5CA6NGD5 496 aaPredicted RBP12.79□□□□□ -0.36
PDPN-210ENST00000513143 SPECC1L-ADORA2AF8WAN1 911 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 CBX4O00257 560 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 MTSS1O43312 755 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 SNAP91O60641 907 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 NUMBP49757 651 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 ARF5P84085 180 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 LMNB2Q03252 620 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 SULT2A1Q06520 285 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 MESP2Q0VG99 397 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 TMEM215Q68D42 235 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 MBLAC2Q68D91 279 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 HEATR6Q6AI08 1181 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms