RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 DDX50Q9BQ39 737 aaKnown RBP19.58■□□□□ 0.72
HMGCS1-206ENST00000511774 CALN1Q9BXU9 219 aa19.58■□□□□ 0.72
HMGCS1-206ENST00000511774 ZFR2Q9UPR6 939 aaKnown RBP19.58■□□□□ 0.72
HMGCS1-206ENST00000511774 A0A1W2PQU0 124 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 RNF225M0QZC1 329 aaPredicted RBP19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 SCAMP1O15126 338 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 CTSLP07711 333 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 ME1P48163 572 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 PITX1P78337 314 aaPredicted RBP19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 DRAP1Q14919 205 aaPredicted RBP19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 ZC3H12AQ5D1E8 599 aaKnown RBP19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 SYPL2Q5VXT5 272 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 CXorf57Q6NSI4 855 aaKnown RBP19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 GUSBP11Q6P575 273 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 CRTC1Q6UUV9 634 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 Q6ZVU0 165 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 OR8D1Q8WZ84 308 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 MIS12Q9H081 205 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 ABCG4Q9H172 646 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 PREBQ9HCU5 417 aa19.57■□□□□ 0.72
HMGCS1-206ENST00000511774 ATP9BO43861 1147 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 IRAK1P51617 712 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 PDX1P52945 283 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 C1QBPQ07021 282 aaKnown RBP19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 SRSF6Q13247 344 aaKnown RBP19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 CDKN3Q16667 212 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 ARL13BQ3SXY8 428 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 HS1BP3Q53T59 392 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 OR6B2Q6IFH4 312 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 CCDC81Q6ZN84 652 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 CHSY1Q86X52 802 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 CCDC117Q8IWD4 279 aaPredicted RBP19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 CCAR2Q8N163 923 aaKnown RBP19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 ARRDC3Q96B67 414 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 SERPINB11Q96P15 392 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 PRMT1Q99873 361 aaKnown RBP19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 KLF15Q9UIH9 416 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 COQ4Q9Y3A0 265 aa19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 UTP20O75691 2785 aaKnown RBP19.56■□□□□ 0.72
HMGCS1-206ENST00000511774 RHOBTB3O94955 611 aa19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 BRD2P25440 801 aaKnown RBP19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 RBMS1P29558 406 aaKnown RBP19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 PLK1P53350 603 aa19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 LRMPQ12912 555 aa19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 NNTQ13423 1086 aa19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 DLG2Q15700 870 aa19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 ZSCAN23Q3MJ62 389 aa19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 PERM1Q5SV97 790 aa19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 SEL1L3Q68CR1 1132 aa19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 ABI3BPQ7Z7G0 1075 aa19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 GPR27Q9NS67 375 aa19.55■□□□□ 0.72
HMGCS1-206ENST00000511774 A0A1B0GVL5 298 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 CPED1A4D0V7 1026 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 M0QYV0 167 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 MCF2LO15068 1137 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 ALPPL2P10696 532 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 NNMTP40261 264 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 FGL2Q14314 439 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 FZD2Q14332 565 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 ACCSLQ4AC99 568 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 TPRG1LQ5T0D9 272 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 FAM46CQ5VWP2 391 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 FOXR1Q6PIV2 292 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 EFL1Q7Z2Z2 1120 aaKnown RBP19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 DSG4Q86SJ6 1040 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 CLEC14AQ86T13 490 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 HORMAD1Q86X24 394 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 GUF1Q8N442 669 aaKnown RBP19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 ZNF548Q8NEK5 533 aaPredicted RBP19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 KAT5Q92993 513 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 BMFQ96LC9 184 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 UPF2Q9HAU5 1272 aaKnown RBP19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 DNAJC28Q9NX36 388 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 PCDHGA8Q9Y5G5 932 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 OR51B4Q9Y5P0 310 aa19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 USP9YO00507 2555 aaPredicted RBP19.54■□□□□ 0.72
HMGCS1-206ENST00000511774 SPTAN1Q13813 2472 aaKnown RBP19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 POM121BA6NF01 834 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 BNIP3LO60238 219 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 IGLV3-25P01717 112 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 PFKFB1P16118 471 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 ITGB6P18564 788 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 RPL13P26373 211 aaKnown RBP19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 VASPP50552 380 aaPredicted RBP19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 DUSP3P51452 185 aaPredicted RBP19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 CENPCQ03188 943 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 ZNF177Q13360 481 aaPredicted RBP19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 SLC12A1Q13621 1099 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 CNGA2Q16280 664 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 C6orf132Q5T0Z8 1188 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 TMEM270Q6UE05 265 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 Q6ZSR6 202 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 USP29Q9HBJ7 922 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 STARD5Q9NSY2 213 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 USP9XQ93008 2570 aaPredicted RBP19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 SCN8AQ9UQD0 1980 aa19.53■□□□□ 0.72
HMGCS1-206ENST00000511774 C1QTNF3-AMACRE9PGA6 284 aa19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 RAD51BO15315 384 aa19.52■□□□□ 0.72
HMGCS1-206ENST00000511774 MT-CO1P00395 513 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms