RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 VDRP11473 427 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 GPD1P21695 349 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 MIPP30301 263 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 CDC25CP30307 473 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 LRPAP1P30533 357 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 ASPAP45381 313 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 NR2C2P49116 596 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 YWHAZP63104 245 aaKnown RBP13.15□□□□□ -0.3
HMGB2-205ENST00000511316 ITGA9Q13797 1035 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 MAP7Q14244 749 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 FSCBQ5H9T9 825 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 SH2D4BQ5SQS7 431 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 TXNRD3NBQ6F5E7 133 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 FUT10Q6P4F1 479 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 DCLRE1AQ6PJP8 1040 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 RIPOR1Q6ZS17 1223 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 PRPF39Q86UA1 669 aaKnown RBP13.15□□□□□ -0.3
HMGB2-205ENST00000511316 ARID3BQ8IVW6 561 aaPredicted RBP13.15□□□□□ -0.3
HMGB2-205ENST00000511316 CCDC33Q8N5R6 958 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 PPM1NQ8N819 430 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 CATSPER1Q8NEC5 780 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 HASPINQ8TF76 798 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 RILPQ96NA2 401 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 ZNF670Q9BS34 389 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 CALN1Q9BXU9 219 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 IGFLR1Q9H665 355 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 SUDS3Q9H7L9 328 aaPredicted RBP13.15□□□□□ -0.3
HMGB2-205ENST00000511316 KRT82Q9NSB4 513 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 DNAJC28Q9NX36 388 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 DCDC2Q9UHG0 476 aa13.15□□□□□ -0.3
HMGB2-205ENST00000511316 FAM237BA0A1B0GVD1 139 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 FAM159BA6NKW6 160 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 B3GAT3O94766 335 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 ENO1P06733 434 aaKnown RBP13.14□□□□□ -0.31
HMGB2-205ENST00000511316 SETSIPP0DME0 302 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 CD19P15391 556 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 IL1R2P27930 398 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 KCNQ1P51787 676 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 COPAP53621 1224 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 MED21Q13503 144 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 KRT81Q14533 505 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 CHI3L2Q15782 390 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 RTP2Q5QGT7 225 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 THEMIS2Q5TEJ8 643 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 JADE1Q6IE81 842 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 IZUMO2Q6UXV1 221 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 ZDHHC17Q8IUH5 632 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 ALDH16A1Q8IZ83 802 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 PIWIL2Q8TC59 973 aaKnown RBP13.14□□□□□ -0.31
HMGB2-205ENST00000511316 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 WDR60Q8WVS4 1066 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 FAM84AQ96KN4 292 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 RNF157Q96PX1 679 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 ASB2Q96Q27 587 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 HERC2P3Q9BVR0 1158 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 DNAI2Q9GZS0 605 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 RPF1Q9H9Y2 349 aaKnown RBP13.14□□□□□ -0.31
HMGB2-205ENST00000511316 POPDC2Q9HBU9 364 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 ARHGEF4Q9NR80 690 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 RAB6BQ9NRW1 208 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 MID2Q9UJV3 735 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 HCFC2Q9Y5Z7 792 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 ANK1P16157 1881 aa13.14□□□□□ -0.31
HMGB2-205ENST00000511316 SDR42E2A6NKP2 422 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 PPEF2O14830 753 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 MDM4O15151 490 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 SLC22A2O15244 555 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 TADA2AO75478 443 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 NFICP08651 508 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 CYP3A5P20815 502 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 FGFR3P22607 806 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 RPL9P32969 192 aaKnown RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 MAGEA3P43357 314 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 BRCC3P46736 316 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 AQP5P55064 265 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 CDH6P55285 790 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 METTL21CQ5VZV1 264 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 RSPO2Q6UXX9 243 aaPredicted RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 DHDDSQ86SQ9 333 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 GPR65Q8IYL9 337 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 FAM172AQ8WUF8 416 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 KLHL5Q96PQ7 755 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 KCNK16Q96T55 309 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 EBNA1BP2Q99848 306 aaKnown RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 MTMR12Q9C0I1 747 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 S1PR5Q9H228 398 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 ASB7Q9H672 318 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 S100A14Q9HCY8 104 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 ENTPD7Q9NQZ7 604 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 METTL5Q9NRN9 209 aaKnown RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 HACD3Q9P035 362 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 THEGQ9P2T0 379 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 SLC7A8Q9UHI5 535 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 VWA8A3KMH1 1905 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 PDCD11Q14690 1871 aaKnown RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 HACD1B0YJ81 288 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 H3BQ06 376 aaPredicted RBP13.13□□□□□ -0.31
HMGB2-205ENST00000511316 PIRO00625 290 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 TEX28O15482 410 aa13.13□□□□□ -0.31
HMGB2-205ENST00000511316 AP1G1O43747 822 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms