RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 POGLUT1Q8NBL1 392 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 LINS1Q8NG48 757 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 GDAP1Q8TB36 358 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 DEPDC1BQ8WUY9 529 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 RAB40AQ8WXH6 277 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 FUBP1Q96AE4 644 aaKnown RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 KLHL29Q96CT2 875 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 ELP4Q96EB1 424 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 ERO1AQ96HE7 468 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 DNAI2Q9GZS0 605 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 USP44Q9H0E7 712 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 SLC25A18Q9H1K4 315 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 IL21RQ9HBE5 538 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 GBA2Q9HCG7 927 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 NCKIPSDQ9NZQ3 722 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 NCDNQ9UBB6 729 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 SNX14Q9Y5W7 946 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 COL16A1Q07092 1604 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 C17orf113A0A1B0GUU1 675 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 A0A1W2PRX2 142 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 CCDC188H7C350 402 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 PHLPP1O60346 1717 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 B4GALT3O60512 393 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 SUN1O94901 812 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 HEXIM1O94992 359 aaKnown RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 TJP3O95049 919 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 SIX3O95343 332 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 ALDOAP04075 364 aaKnown RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 CYP1A1P04798 512 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 TPOP07202 933 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 DLDP09622 509 aaKnown RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 CCDC175P0C221 793 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 ACP5P13686 325 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 ATP5F1P24539 256 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 ADRA1DP25100 572 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 DUSP1P28562 367 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 GJC1P36383 396 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 THPOP40225 353 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 TNNT3P45378 269 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 HARS2P49590 506 aaKnown RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 NDUFV1P49821 464 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 BLKP51451 505 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 CLCN2P51788 898 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 HDAC4P56524 1084 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 NEXNQ0ZGT2 675 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 WASHC5Q12768 1159 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 DCTN2Q13561 401 aaKnown RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 PCLAFQ15004 111 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 SHBQ15464 509 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 ADIPOQQ15848 244 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 RNF151Q2KHN1 245 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 PTCHD3Q3KNS1 767 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 C2orf76Q3KRA6 126 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 C1orf141Q5JVX7 400 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 KRT79Q5XKE5 535 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 ATG9BQ674R7 924 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 NUGGCQ68CJ6 796 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 GJB7Q6PEY0 223 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 MSANTD1Q6ZTZ1 278 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 MED25Q71SY5 747 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 GSTA5Q7RTV2 222 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 GALNT7Q86SF2 657 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 METTL23Q86XA0 190 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 IZUMO1Q8IYV9 350 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 WDTC1Q8N5D0 677 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 TMCO5AQ8N6Q1 288 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 KCTD6Q8NC69 237 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 GOT1L1Q8NHS2 421 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 ADAMTS17Q8TE56 1095 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 RSPH1Q8WYR4 309 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 INTS12Q96CB8 462 aaKnown RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 KIF1BPQ96EK5 621 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 PGAP3Q96FM1 320 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 LRIG1Q96JA1 1093 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 LCORQ96JN0 433 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 CMTM3Q96MX0 182 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 CPPED1Q9BRF8 314 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 MECRQ9BV79 373 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 TTC12Q9H892 705 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 PDE7BQ9NP56 450 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 SIRT3Q9NTG7 399 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 ZDHHC7Q9NXF8 308 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 GAR1Q9NY12 217 aaKnown RBP2.38□□□□□ -2.03
PDE4D-218ENST00000509368 TAB2Q9NYJ8 693 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 WDR35Q9P2L0 1181 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 SEL1LQ9UBV2 794 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 FBXO40Q9UH90 709 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 OSGIN1Q9UJX0 560 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 SETBP1Q9Y6X0 1596 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 FAM169AQ9Y6X4 670 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 ADGRL2O95490 1459 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 CCDC141Q6ZP82 1450 aa2.38□□□□□ -2.03
PDE4D-218ENST00000509368 TSPY2A6NKD2 308 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 MATN2O00339 956 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 SLC16A3O15427 465 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 GPR42O15529 346 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ADAM20O43506 726 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 PRICKLE3O43900 615 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms