RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	LOC105369274	A0A096LPK9	316 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	LOC102723532	A0A0G2JNH3	316 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	SLC22A23	A1A5C7	686 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	TTC34	A8MYJ7	566 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	ANXA6	P08133	673 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	EPHX2	P34913	555 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	STAT6	P42226	847 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	VPS41	P49754	854 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	DMWD	Q09019	674 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	LAMB3	Q13751	1172 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	GRM4	Q14833	912 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	TRIM71	Q2Q1W2	868 aa	Known RBP	4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	SLC9C1	Q4G0N8	1177 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	EPHA10	Q5JZY3	1008 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	XRRA1	Q6P2D8	792 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	CTU1	Q7Z7A3	348 aa	Known RBP	4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	SKAP1	Q86WV1	359 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	FAM186B	Q8IYM0	893 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	OR4N4	Q8N0Y3	316 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	SLC22A17	Q8WUG5	538 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	PIGB	Q92521	554 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	IP6K1	Q92551	441 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	MCRS1	Q96EZ8	462 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	TRMT61A	Q96FX7	289 aa	Known RBP	4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	LTV1	Q96GA3	475 aa	Predicted RBP	4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	ELAC2	Q9BQ52	826 aa	Known RBP	4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	ELOVL1	Q9BW60	279 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	TTLL2	Q9BWV7	592 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	ZNF700	Q9H0M5	742 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	POLK	Q9UBT6	870 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	CEP83	Q9Y592	693 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	SLX4	Q8IY92	1834 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	EYS	Q5T1H1	3165 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	ANKRD31	Q8N7Z5	1873 aa		4.64	□□□□□ -1.67
NFKB1-208	ENST00000509165	NRXN2	Q9P2S2	1712 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	SIPA1L3	O60292	1781 aa	Predicted RBP	4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	NCOR1	O75376	2440 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	PNMA6E	A0A0J9YXQ4	647 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	SOCS2	O14508	198 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	PIP5K1B	O14986	540 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	KAT7	O95251	611 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	SLC3A2	P08195	630 aa	Known RBP	4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	ST6GAL1	P15907	406 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	NPPB	P16860	134 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	SERPINB3	P29508	390 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	HOXC9	P31274	260 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	STIM1	Q13586	685 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	CSHL1	Q14406	222 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	LCE1A	Q5T7P2	110 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	MRPL10	Q7Z7H8	261 aa	Known RBP	4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	SLC39A13	Q96H72	371 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	TMEM41A	Q96HV5	264 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	COG3	Q96JB2	828 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	EPS8L2	Q9H6S3	715 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	NLRC4	Q9NPP4	1024 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	HEY2	Q9UBP5	337 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	HACL1	Q9UJ83	578 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	RNF123	Q5XPI4	1314 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	CARMIL3	Q8ND23	1372 aa		4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.63	□□□□□ -1.67
NFKB1-208	ENST00000509165		H0YGN5	161 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	USP12	O75317	370 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	SGPL1	O95470	568 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	CER1	O95813	267 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	BMP15	O95972	392 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	IGKV2-30	P06310	120 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	RFPL3S	P0C7P2	107 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	CYP19A1	P11511	503 aa	Predicted RBP	4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	PPM1A	P35813	382 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	IL6ST	P40189	918 aa	Predicted RBP	4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	BTK	Q06187	659 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	MTA1	Q13330	715 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	TWIST1	Q15672	202 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	P3H1	Q32P28	736 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	IRF2BP2	Q7Z5L9	587 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	SYTL1	Q8IYJ3	562 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	EXD3	Q8N9H8	876 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	C9orf106	Q8NAJ2	232 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	PIGK	Q92643	395 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	PMM1	Q92871	262 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	VCPIP1	Q96JH7	1222 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	ZFYVE19	Q96K21	471 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	EIF3C	Q99613	913 aa	Known RBP	4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	MOV10	Q9HCE1	1003 aa	Known RBP	4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	FBXO28	Q9NVF7	368 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	RNF186	Q9NXI6	227 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	CDC23	Q9UJX2	597 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	B3GNT3	Q9Y2A9	372 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	PCDHB7	Q9Y5E2	793 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	BDP1	A6H8Y1	2624 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	CACNA1G	O43497	2377 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	MRC1	P22897	1456 aa		4.62	□□□□□ -1.67
NFKB1-208	ENST00000509165	UBR2	Q8IWV8	1755 aa		4.61	□□□□□ -1.67
NFKB1-208	ENST00000509165	AQP12B	A6NM10	295 aa		4.61	□□□□□ -1.67
NFKB1-208	ENST00000509165		M0QYT0	321 aa		4.61	□□□□□ -1.67
NFKB1-208	ENST00000509165	NKX2-8	O15522	239 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms