RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 MPP6Q9NZW5 540 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 ZNF212Q9UDV6 495 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 STAP1Q9ULZ2 295 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 SIK3Q9Y2K2 1263 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 ANKRD11Q6UB99 2663 aaPredicted RBP16.66■□□□□ 0.26
LMNA-222ENST00000508500 ADAMTS20P59510 1910 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 MYLKQ15746 1914 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 IGLV3-10A0A075B6K4 115 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 A0A0D9SEW6 157 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 H0Y8X5 98 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 TAF4O00268 1085 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 SNAP91O60641 907 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 LSM8O95777 96 aaKnown RBP16.65■□□□□ 0.26
LMNA-222ENST00000508500 ADH1BP00325 375 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 FTH1P19P0C7X4 201 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 SRCP12931 536 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 NNMTP40261 264 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 OXCT1P55809 520 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 POLR2FP61218 127 aaKnown RBP16.65■□□□□ 0.26
LMNA-222ENST00000508500 PPP2CBP62714 309 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 RACK1P63244 317 aaKnown RBP16.65■□□□□ 0.26
LMNA-222ENST00000508500 PPP2CAP67775 309 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 MTA1Q13330 715 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 DLG2Q15700 870 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 ZNF423Q2M1K9 1284 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.65■□□□□ 0.26
LMNA-222ENST00000508500 SND1Q7KZF4 910 aaKnown RBP eCLIP16.65■□□□□ 0.265e-9■■□□□ 13.7
LMNA-222ENST00000508500 GLRX5Q86SX6 157 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 SH2D3CQ8N5H7 860 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 EMC1Q8N766 993 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 C1orf74Q96LT6 269 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 SPAG5Q96R06 1193 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 HSD3B7Q9H2F3 369 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 NLRC4Q9NPP4 1024 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 FAM207AQ9NSI2 230 aaPredicted RBP16.65■□□□□ 0.26
LMNA-222ENST00000508500 TOR4AQ9NXH8 423 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 VPS28Q9UK41 221 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 PPM1HQ9ULR3 514 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 PCDHGB2Q9Y5G2 931 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 COL5A1P20908 1838 aaPredicted RBP16.65■□□□□ 0.26
LMNA-222ENST00000508500 KNTC1P50748 2209 aa16.65■□□□□ 0.26
LMNA-222ENST00000508500 A0A1W2PR77 199 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 K7ERQ8 282 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 ENDOD1O94919 500 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 CTSLP07711 333 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 CCR5P51681 352 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 COPB1P53618 953 aaKnown RBP16.64■□□□□ 0.25
LMNA-222ENST00000508500 CDR2Q01850 454 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 PTP4A2Q12974 167 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 TEAD4Q15561 434 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 ACCSLQ4AC99 568 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 PRAMEF14Q5SWL7 426 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 Q6ZVU0 165 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 APTXQ7Z2E3 356 aaKnown RBP16.64■□□□□ 0.25
LMNA-222ENST00000508500 PHLDB2Q86SQ0 1253 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 OR14C36Q8NHC7 312 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 SETD7Q8WTS6 366 aaKnown RBP16.64■□□□□ 0.25
LMNA-222ENST00000508500 ADAMTS14Q8WXS8 1223 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 ZCCHC14Q8WYQ9 949 aaKnown RBP16.64■□□□□ 0.25
LMNA-222ENST00000508500 PCDHB18PQ96TA0 734 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 MAGEB5Q9BZ81 275 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 METTL5Q9NRN9 209 aaKnown RBP16.64■□□□□ 0.25
LMNA-222ENST00000508500 ARHGAP20Q9P2F6 1191 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 SLC25A13Q9UJS0 675 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 HS3ST2Q9Y278 367 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 PCDHB9Q9Y5E1 797 aa16.64■□□□□ 0.25
LMNA-222ENST00000508500 LRRC72A6NJI9 287 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 E9PAM4 449 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 MCF2LO15068 1137 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 VILLO15195 856 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 SMAD6O43541 496 aaKnown RBP16.63■□□□□ 0.25
LMNA-222ENST00000508500 LATO43561 262 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 RTN2O75298 545 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 TRIM16O95361 564 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 GJB6O95452 261 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 F9P00740 461 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 RHOCP08134 193 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 ZNF18P17022 549 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 MMP8P22894 467 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 GLDCP23378 1020 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 SOX5P35711 763 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 SFSWAPQ12872 951 aaKnown RBP16.63■□□□□ 0.25
LMNA-222ENST00000508500 NCAPHQ15003 741 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 SHBQ15464 509 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 POM121L1PQ3SYA9 428 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 ARCQ7LC44 396 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 TFAP2DQ7Z6R9 452 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 FAM131BQ86XD5 332 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 ZNF677Q86XU0 584 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 JOSD2Q8TAC2 188 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 SLC30A5Q8TAD4 765 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 OR8D1Q8WZ84 308 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 MUC3BQ9H195 1237 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 LIMA1Q9UHB6 759 aaKnown RBP16.63■□□□□ 0.25
LMNA-222ENST00000508500 VPS51Q9UID3 782 aa16.63■□□□□ 0.25
LMNA-222ENST00000508500 LOC400499M0QZD8 3231 aa16.62■□□□□ 0.25
LMNA-222ENST00000508500 FLRT2O43155 660 aa16.62■□□□□ 0.25
LMNA-222ENST00000508500 DKK1O94907 266 aa16.62■□□□□ 0.25
LMNA-222ENST00000508500 ATXN1LP0C7T5 689 aaKnown RBP16.62■□□□□ 0.25
LMNA-222ENST00000508500 UNGP13051 313 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms