RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 SGSHP51688 502 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 SARNPP82979 210 aaKnown RBP12.88□□□□□ -0.35
SIL1-209ENST00000507002 ZXDBP98169 803 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 MTM1Q13496 603 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 SERINC3Q13530 473 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 TEAD2Q15562 447 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 CCDC38Q502W7 563 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 ARHGAP15Q53QZ3 475 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 ZNF697Q5TEC3 545 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 TTC39BQ5VTQ0 682 aaPredicted RBP12.88□□□□□ -0.35
SIL1-209ENST00000507002 PPP2R2DQ66LE6 453 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 CROCCP2Q86T23 111 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 RBM23Q86U06 439 aaKnown RBP12.88□□□□□ -0.35
SIL1-209ENST00000507002 ZNF354CQ86Y25 554 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 CNTD1Q8N815 330 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 ATP11CQ8NB49 1132 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 HJURPQ8NCD3 748 aaPredicted RBP12.88□□□□□ -0.35
SIL1-209ENST00000507002 FBXO36Q8NEA4 188 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 GDPD5Q8WTR4 605 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 ARNTL2Q8WYA1 636 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 GORASP1Q9BQQ3 440 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 PRKD2Q9BZL6 878 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 TASP1Q9H6P5 420 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 TLE6Q9H808 572 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 VPS37BQ9H9H4 285 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 GLOD4Q9HC38 313 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 RBM22Q9NW64 420 aaKnown RBP eCLIP12.88□□□□□ -0.35
SIL1-209ENST00000507002 ZDHHC7Q9NXF8 308 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 ARHGAP26Q9UNA1 814 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 CHMP2BQ9UQN3 213 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 SH3BP1Q9Y3L3 701 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 HCFC2Q9Y5Z7 792 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 C2orf16Q68DN1 1984 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 MYOFQ9NZM1 2061 aa12.88□□□□□ -0.35
SIL1-209ENST00000507002 NUP210Q8TEM1 1887 aaPredicted RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 ERI2A8K979 691 aaKnown RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 J3KR12 359 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 GFRA2O00451 464 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 POLR3GO15318 223 aaPredicted RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 PSMD3O43242 534 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 RRP9O43818 475 aaKnown RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 AVILO75366 819 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 NEBLO76041 1014 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 AP2A1O95782 977 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 PEX11BO96011 259 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 HLA-DQB2P05538 268 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 IVLP07476 585 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 RHOCP08134 193 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 MLNP12872 115 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 ELK3P41970 407 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 GRIA1P42261 906 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 GPX6P59796 221 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 NTHL1P78549 312 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 CBX1P83916 185 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 GNA12Q03113 381 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 IL10RBQ08334 325 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 ZNF177Q13360 481 aaPredicted RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 PRPSAP1Q14558 356 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 DUSP6Q16828 381 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 SLC5A9Q2M3M2 681 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 AGBL2Q5U5Z8 902 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 CAPN12Q6ZSI9 719 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 HTR3DQ70Z44 454 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 OTOP3Q7RTS5 596 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 IGDCC3Q8IVU1 814 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 FAM217AQ8IXS0 508 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 AGGF1Q8N302 714 aaeCLIP12.87□□□□□ -0.355e-7■■■□□ 18.6
SIL1-209ENST00000507002 TTC16Q8NEE8 873 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 EPS8L3Q8TE67 593 aaKnown RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 NSMCE1Q8WV22 266 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 ZNF707Q96C28 371 aaPredicted RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 ZNF419Q96HQ0 510 aaPredicted RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 MLPHQ9BV36 600 aaPredicted RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 ROPN1BQ9BZX4 212 aaPredicted RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 MAGEH1Q9H213 219 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 CENPHQ9H3R5 247 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 ROPN1Q9HAT0 212 aaPredicted RBP12.87□□□□□ -0.35
SIL1-209ENST00000507002 VPS18Q9P253 973 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 ZNF510Q9Y2H8 683 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 TEX264Q9Y6I9 313 aa12.87□□□□□ -0.35
SIL1-209ENST00000507002 CCDC195A0A1B0GUA6 201 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 TLDC2A0PJX2 215 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 ILVBLA1L0T0 632 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 GOLGA6CA6NDK9 693 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 EPOPA6NHQ4 379 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 SMIM23A6NLE4 172 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 SOBPA7XYQ1 873 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 HMGB1P1B2RPK0 211 aaPredicted RBP12.86□□□□□ -0.35
SIL1-209ENST00000507002 LEFTY2O00292 366 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 RASGRF2O14827 1237 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 CACNG3O60359 315 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 PRAMEF11O60813 436 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 TBL1XO60907 577 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 SUN1O94901 812 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 CPP00450 1065 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 GOLGA6DP0CG33 693 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 PHBP35232 272 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 IFNAR2P48551 515 aa12.86□□□□□ -0.35
SIL1-209ENST00000507002 NRIP1P48552 1158 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms