RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 FAM170AA1A519 330 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 E9PAM4 449 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 F5H5T6 163 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 THAP12O43422 761 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 SMAD6O43541 496 aaKnown RBP13.75□□□□□ -0.21
DDX41-206ENST00000506965 SIGLEC6O43699 453 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 GADD45BO75293 160 aaPredicted RBP13.75□□□□□ -0.21
DDX41-206ENST00000506965 ZNF821O75541 412 aaPredicted RBP13.75□□□□□ -0.21
DDX41-206ENST00000506965 SMC2O95347 1197 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 APOEP02649 317 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 PRLRP16471 622 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 GLDCP23378 1020 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 GNA15P30679 374 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 ABCG1P45844 678 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 ACADSBP45954 432 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 DLG2Q15700 870 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 MEA1Q16626 185 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 C5orf22Q49AR2 442 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 PTPN20Q4JDL3 420 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 TRNP1Q6NT89 227 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 FOXR2Q6PJQ5 311 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 TRIM69Q86WT6 500 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 ERICH1Q86X53 443 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 IRF2BP1Q8IU81 584 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 CHST14Q8NCH0 376 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 RFFLQ8WZ73 363 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 NXPE2Q96DL1 559 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 GTPBP4Q9BZE4 634 aaKnown RBP13.75□□□□□ -0.21
DDX41-206ENST00000506965 SIX2Q9NPC8 291 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX41-206ENST00000506965 DDIT4Q9NX09 232 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 ZNF212Q9UDV6 495 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 CEP83Q9Y592 693 aa13.75□□□□□ -0.21
DDX41-206ENST00000506965 A0A1W2PNU3 283 aaPredicted RBP13.74□□□□□ -0.21
DDX41-206ENST00000506965 TYW5A2RUC4 315 aaKnown RBP13.74□□□□□ -0.21
DDX41-206ENST00000506965 CAPN9O14815 690 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 MCF2LO15068 1137 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 BRINP1O60477 761 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 PAGE1O75459 146 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 ADCY5O95622 1261 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 AFPP02771 609 aaKnown RBP13.74□□□□□ -0.21
DDX41-206ENST00000506965 C1SP09871 688 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 CKMT2P17540 419 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 ACP1P24666 158 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 SLC12A1Q13621 1099 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 FGL2Q14314 439 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 INAVAQ3KP66 663 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 TPRG1LQ5T0D9 272 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 TRIM65Q6PJ69 517 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 DCBLD1Q8N8Z6 715 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 C1orf131Q8NDD1 294 aaKnown RBP13.74□□□□□ -0.21
DDX41-206ENST00000506965 OR2A12Q8NGT7 310 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 SNIP1Q8TAD8 396 aaKnown RBP13.74□□□□□ -0.21
DDX41-206ENST00000506965 SRRTQ9BXP5 876 aaKnown RBP13.74□□□□□ -0.21
DDX41-206ENST00000506965 FAM204AQ9H8W3 233 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 PLCB1Q9NQ66 1216 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 PIGVQ9NUD9 493 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 TBC1D30Q9Y2I9 924 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 ATP6V1DQ9Y5K8 247 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 ACTL7AQ9Y615 435 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 BSNQ9UPA5 3926 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 COL6A6A6NMZ7 2263 aa13.74□□□□□ -0.21
DDX41-206ENST00000506965 A0A0D9SEW6 157 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 SLC31A1O15431 190 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 SART1O43290 800 aaKnown RBP13.73□□□□□ -0.21
DDX41-206ENST00000506965 MOCS3O95396 460 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 DGKAP23743 735 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 CLDN2P57739 230 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 ZNF284Q2VY69 593 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 RAB6CQ53S08 254 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 RNF219Q5W0B1 726 aaPredicted RBP13.73□□□□□ -0.21
DDX41-206ENST00000506965 SEL1L3Q68CR1 1132 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 GCNT7Q6ZNI0 430 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 ELOA2Q8IYF1 753 aaPredicted RBP13.73□□□□□ -0.21
DDX41-206ENST00000506965 ATP6V0D2Q8N8Y2 350 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 OR13H1Q8NG92 308 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 OR8D1Q8WZ84 308 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 SHC3Q92529 594 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 RPRD1AQ96P16 312 aaPredicted RBP13.73□□□□□ -0.21
DDX41-206ENST00000506965 NRSN2Q9GZP1 204 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 RAB6CQ9H0N0 254 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 GPR27Q9NS67 375 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 HS3ST2Q9Y278 367 aa13.73□□□□□ -0.21
DDX41-206ENST00000506965 SCN8AQ9UQD0 1980 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 A0A1W2PQU0 124 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 RAD51BO15315 384 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 YKT6O15498 198 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 SLC7A4O43246 635 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 RNGTTO60942 597 aaKnown RBP13.72□□□□□ -0.21
DDX41-206ENST00000506965 RRM1P23921 792 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 ARRB1P49407 418 aaPredicted RBP13.72□□□□□ -0.21
DDX41-206ENST00000506965 TLE3Q04726 772 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 NME3Q13232 169 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 C6orf118Q5T5N4 469 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 CDCP2Q5VXM1 449 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 LINGO4Q6UY18 593 aa13.72□□□□□ -0.21
DDX41-206ENST00000506965 PRPF39Q86UA1 669 aaKnown RBP13.72□□□□□ -0.21
DDX41-206ENST00000506965 IQCHQ86VS3 1027 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms