RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 LAMP2P13473 410 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 COX7A2P14406 83 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 PKMP14618 531 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 HOXB9P17482 250 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 GSTM2P28161 218 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 PCSK6P29122 969 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 AVPR2P30518 371 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 HOXD13P35453 343 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 MLH1P40692 756 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 STAT6P42226 847 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 GRIA3P42263 894 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 SLC37A1P57057 533 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 RPS3AP61247 264 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 KRTAP1-1Q07627 177 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 GAB1Q13480 694 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 DCTN2Q13561 401 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 CUL4AQ13619 759 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 BYSLQ13895 437 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 GLE1Q53GS7 698 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 RILPL1Q5EBL4 403 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 AARS2Q5JTZ9 985 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 PCID2Q5JVF3 399 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 MTFR2Q6P444 385 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 Q6ZNX1 250 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 RHOUQ7L0Q8 258 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 RRM2BQ7LG56 351 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 PXKQ7Z7A4 578 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 SCN4BQ8IWT1 228 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 PALM2Q8IXS6 379 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 TMTC2Q8N394 836 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 BEND2Q8NDZ0 799 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 PROKR1Q8TCW9 393 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 CREB3L4Q8TEY5 395 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 CNOT9Q92600 299 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 HS6ST2Q96MM7 605 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 C8orf49Q96NF6 230 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 PLEKHG4BQ96PX9 1271 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 EYA3Q99504 573 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 MPHOSPH8Q99549 860 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 THAP7Q9BT49 309 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 HDHD5Q9BXW7 423 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 SYNCQ9H7C4 482 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 PRKRIP1Q9H875 184 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 SMYD2Q9NRG4 433 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 ANKEF1Q9NU02 776 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 SARDHQ9UL12 918 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 MED1Q15648 1581 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 VWDEQ8N2E2 1590 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 DHX29Q7Z478 1369 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 ABCC3O15438 1527 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 ADGBQ8N7X0 1667 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 ALKQ9UM73 1620 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 SHANK2Q9UPX8 1470 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 MAST3O60307 1309 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 UGGT1Q9NYU2 1555 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 NPHP4O75161 1426 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 B4DLN1 442 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 CLIC1O00299 241 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 DSCR3O14972 297 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 MT-CO3P00414 261 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 ADRB1P08588 477 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 SPARCP09486 303 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 ALDOCP09972 364 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 EBLN1P0CF75 366 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 HKR1P10072 659 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 SFPQP23246 707 aaKnown RBP eCLIP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 FPR3P25089 353 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 ITPKBP27987 946 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 NDUFS1P28331 727 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 MAPK4P31152 587 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 HOXD12P35452 270 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 VPS41P49754 854 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 UFM1P61960 85 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 WDR5P61964 334 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 MRPS35P82673 323 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 SHC2P98077 582 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 B4GALNT1Q00973 533 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 PUM1Q14671 1186 aaKnown RBP eCLIP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 MFSD13AQ14CX5 517 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 PTPAQ15257 358 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 GXYLT1Q4G148 440 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 RNASE12Q5GAN4 147 aaKnown RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 SH2D4BQ5SQS7 431 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 MFSD4BQ5TF39 518 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 ZNF804AQ7Z570 1209 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 GALNT5Q7Z7M9 940 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 GALNT7Q86SF2 657 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 MON1AQ86VX9 555 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 TMEM200AQ86VY9 491 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 BRSK2Q8IWQ3 736 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 CCDC105Q8IYK2 499 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 VPS52Q8N1B4 723 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 LINC01465Q8N7H1 131 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 TERB1Q8NA31 727 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 MAFAQ8NHW3 353 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 USP6NLQ92738 828 aa3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 DVL3Q92997 716 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-205ENST00000506426 NSUN4Q96CB9 384 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms