RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 MAPK15Q8TD08 544 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 PARD3BQ8TEW8 1205 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 KCTD13Q8WZ19 329 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 PTPRN2Q92932 1015 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TMEM159Q96B96 161 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 DHX58Q96C10 678 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 ARHGAP9Q9BRR9 750 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 NT5C1AQ9BXI3 368 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 LRRC27Q9C0I9 530 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 BLZF1Q9H2G9 400 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TNMDQ9H2S6 317 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 SMYD3Q9H7B4 428 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 ZFAND3Q9H8U3 227 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 NUDT5Q9UKK9 219 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 INTS6Q9UL03 887 aaKnown RBP6.22□□□□□ -1.41
GYPB-204ENST00000504951 UBE4BO95155 1302 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 A0A1W2PQ27 194 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 A0A1W2PQ64 194 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 A0A1W2PQC6 194 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 FAM47DPA6NHR8 397 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 PLD2O14939 933 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 ALOX15BO15296 676 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 TNFSF15O95150 251 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 VNN1O95497 513 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 F12P00748 615 aaPredicted RBP6.21□□□□□ -1.42
GYPB-204ENST00000504951 CSF2P04141 144 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 LIPCP11150 499 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 PDCP20941 246 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 MZF1P28698 734 aaPredicted RBP6.21□□□□□ -1.42
GYPB-204ENST00000504951 PLK1P53350 603 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 DLG4P78352 724 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 SULT2A1Q06520 285 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 NCOA4Q13772 614 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 STK38Q15208 465 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 ZACNQ401N2 412 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 C3orf38Q5JPI3 329 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 FAM26FQ5R3K3 315 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 FAM46CQ5VWP2 391 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 ARHGAP17Q68EM7 881 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 MSANTD2Q6P1R3 559 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 CACUL1Q86Y37 369 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 SLC9A9Q8IVB4 645 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 UNC45BQ8IWX7 931 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 SPATA20Q8TB22 786 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 GANCQ8TET4 914 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 EXTL1Q92935 676 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 NAT6Q93015 286 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 ATXN7L3BQ96GX2 97 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 SPAG5Q96R06 1193 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 C7orf25Q9BPX7 421 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 DDX50Q9BQ39 737 aaKnown RBP6.21□□□□□ -1.42
GYPB-204ENST00000504951 BOCQ9BWV1 1114 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 SLC39A2Q9NP94 309 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 DMAC2Q9NW81 257 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 UCKL1Q9NWZ5 548 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 SEPT10Q9P0V9 454 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 HMGXB4Q9UGU5 601 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 PPM1HQ9ULR3 514 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 ERVW-1Q9UQF0 538 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 ICE1Q9Y2F5 2266 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 ITPR2Q14571 2701 aa6.21□□□□□ -1.42
GYPB-204ENST00000504951 DOPEY1Q5JWR5 2465 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.2□□□□□ -1.42
GYPB-204ENST00000504951 LRRIQ3A6PVS8 624 aaPredicted RBP6.2□□□□□ -1.42
GYPB-204ENST00000504951 MCF2LO15068 1137 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 MAPK13O15264 365 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 SPTLC2O15270 562 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 PHACTR2O75167 634 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 ZBED1O96006 694 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 MYF5P13349 255 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 NME1P15531 152 aaKnown RBP6.2□□□□□ -1.42
GYPB-204ENST00000504951 SLC5A2P31639 672 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 CCKBRP32239 447 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 CD70P32970 193 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 CSKP41240 450 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 ASPAP45381 313 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 YWHAGP61981 247 aaKnown RBP eCLIP6.2□□□□□ -1.42
GYPB-204ENST00000504951 PPP2CBP62714 309 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 PPP2CAP67775 309 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 ECT2LQ008S8 904 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 ZNF177Q13360 481 aaPredicted RBP6.2□□□□□ -1.42
GYPB-204ENST00000504951 CUL4BQ13620 913 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.2□□□□□ -1.42
GYPB-204ENST00000504951 KRTAP21-3Q3LHN1 58 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 ZSCAN23Q3MJ62 389 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 FAM133BQ5BKY9 247 aaKnown RBP6.2□□□□□ -1.42
GYPB-204ENST00000504951 FOXD4L5Q5VV16 416 aaPredicted RBP6.2□□□□□ -1.42
GYPB-204ENST00000504951 NUGGCQ68CJ6 796 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 SPOPLQ6IQ16 392 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 SCARA5Q6ZMJ2 495 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 BHLHA9Q7RTU4 235 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 TMC6Q7Z403 805 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 DSG4Q86SJ6 1040 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 TICAM1Q8IUC6 712 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 GRAMD1CQ8IYS0 662 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 SDR16C5Q8N3Y7 309 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 ANKRD52Q8NB46 1076 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 GOLGA5Q8TBA6 731 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 WFDC5Q8TCV5 224 aa6.2□□□□□ -1.42
GYPB-204ENST00000504951 FRS2Q8WU20 508 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms