RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 MTG2Q9H4K7 406 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 C2orf42Q9NWW7 574 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 CACNA2D2Q9NY47 1150 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 SAE1Q9UBE0 346 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 VPS51Q9UID3 782 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 SLCO3A1Q9UIG8 710 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 ERVW-1Q9UQF0 538 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 ZKSCAN5Q9Y2L8 839 aa13.58□□□□□ -0.24
PDLIM7-212ENST00000504380 MYO18AQ92614 2054 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 NYNRINQ9P2P1 1898 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 GOLGA6L9A6NEM1 432 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 J3KR12 359 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 K7ERQ8 282 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 KCNK3O14649 394 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 APOL1O14791 398 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 CST8O60676 142 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 ZMPSTE24O75844 475 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 MT-CO1P00395 513 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 HLA-EP13747 358 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 CXCR5P32302 372 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 NDST2P52849 883 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 FOXK2Q01167 660 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 SLC12A1Q13621 1099 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 LRRC32Q14392 662 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 DMC1Q14565 340 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 ZNF234Q14588 700 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 PAFAH1B3Q15102 231 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 PTPRNQ16849 979 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 FNDC3BQ53EP0 1204 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 DGKKQ5KSL6 1271 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 SLC9A4Q6AI14 798 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 ZNF783Q6ZMS7 281 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 NUDT18Q6ZVK8 323 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 PLD5Q8N7P1 536 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 ZNF513Q8N8E2 541 aaPredicted RBP13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 TXNDC5Q8NBS9 432 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 MRGPRX3Q96LB0 322 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 ACE2Q9BYF1 805 aaPredicted RBP13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 OSBPL8Q9BZF1 889 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 MAGEH1Q9H213 219 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 KCND1Q9NSA2 647 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 HEY1Q9Y5J3 304 aa13.57□□□□□ -0.24
PDLIM7-212ENST00000504380 CHD5Q8TDI0 1954 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 TCRBV7S2A1N4TA0A589 114 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 ARHGAP42A6NI28 874 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 TTC34A8MYJ7 566 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 ZNF487B1APH4 448 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 SGK1O00141 431 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 TIMM44O43615 452 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 KDELR3O43731 214 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 DLDP09622 509 aaKnown RBP13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 PECAM1P16284 738 aaPredicted RBP13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 AOC1P19801 751 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 PRKCHP24723 683 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 IL12RB1P42701 662 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 YBEYP58557 167 aaPredicted RBP13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 ARF5P84085 180 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 ECT2LQ008S8 904 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 SERINC3Q13530 473 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 FBXO43Q4G163 708 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 HS1BP3Q53T59 392 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 TMEM105Q8N8V8 129 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 DCAF4L2Q8NA75 395 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 IL17RCQ8NAC3 791 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 UCMAQ8WVF2 138 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 CLDN23Q96B33 292 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 MYO19Q96H55 970 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 FAM118BQ9BPY3 351 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 RETREG1Q9H6L5 497 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 DTLQ9NZJ0 730 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 DLGAP2Q9P1A6 1054 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 THAP10Q9P2Z0 257 aaPredicted RBP13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 STARD13Q9Y3M8 1113 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 RAD54BQ9Y620 910 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 STON1Q9Y6Q2 735 aa13.56□□□□□ -0.24
PDLIM7-212ENST00000504380 FANCGO15287 622 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 NCAM2O15394 837 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 SMAD6O43541 496 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 ADAM23O75077 832 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 CD160O95971 181 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 ATP5BP06576 529 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 HNRNPLP14866 589 aaKnown RBP eCLIP13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 VAV1P15498 845 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 COPS2P61201 443 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 MRPS21P82921 87 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 EIF4HQ15056 248 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 PPP2R5EQ16537 467 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 PARP15Q460N3 678 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 ADAT2Q7Z6V5 191 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 VSIG1Q86XK7 387 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 CHPFQ8IZ52 775 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 LZTR1Q8N653 840 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 C2orf49Q9BVC5 232 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 OSBPL6Q9BZF3 934 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 IPO11Q9UI26 975 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 SLC25A13Q9UJS0 675 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 PLA2G4CQ9UP65 541 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 FCF1Q9Y324 198 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 JRKLQ9Y4A0 524 aa13.55□□□□□ -0.24
PDLIM7-212ENST00000504380 MUC22E2RYF6 1773 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms