RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 GLDCP23378 1020 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 STAT1P42224 750 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 PTPN9P43378 593 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 PSMD8P48556 350 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 CSNK1EP49674 416 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 HDAC4P56524 1084 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 ZNF177Q13360 481 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 KIF19Q2TAC6 998 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 PPP1R15BQ5SWA1 713 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 TRIM72Q6ZMU5 477 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 IRF2BP2Q7Z5L9 587 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 SETD3Q86TU7 594 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 NLRP14Q86W24 1093 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 FAM131BQ86XD5 332 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 CCDC117Q8IWD4 279 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 RXFP2Q8WXD0 754 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 SPAG5Q96R06 1193 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 PDCL3Q9H2J4 239 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 NDFIP2Q9NV92 336 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 TMEM51Q9NW97 253 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 ARHGAP20Q9P2F6 1191 aa14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 PPARGC1AQ9UBK2 798 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-211ENST00000504318 ARID1BQ8NFD5 2236 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 PTPRBP23467 1997 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 A0A1W2PR77 199 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 FAM72CH0Y354 149 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 K7ERQ8 282 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 PLK4O00444 970 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 MCF2LO15068 1137 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 SMAD6O43541 496 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 LATO43561 262 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 ADH1BP00325 375 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 CTSKP43235 329 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 AFF3P51826 1226 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 ATXN3P54252 364 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 TAS2R38P59533 333 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 PPP2CBP62714 309 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 PPP2CAP67775 309 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 UBXN1Q04323 297 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 DLG2Q15700 870 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 HLA-BQ31612 363 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 ACBD5Q5T8D3 534 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 FAM72AQ5TYM5 149 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 AGBL4Q5VU57 503 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 E4F1Q66K89 784 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 FAM72DQ6L9T8 149 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 Q6ZVU0 165 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 PHLDB2Q86SQ0 1253 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 FAM72BQ86X60 149 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 HDDC3Q8N4P3 179 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 DCAF4L2Q8NA75 395 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 OR2A12Q8NGT7 310 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 OR2T34Q8NGX1 318 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 GAREM1Q9H706 876 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 VPS28Q9UK41 221 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 SNX11Q9Y5W9 270 aa14.35□□□□□ -0.11
PDLIM7-211ENST00000504318 IGF2RP11717 2491 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 ALOX15BO15296 676 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 PLRG1O43660 514 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 RNASEH1O60930 286 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 RNASEH2AO75792 299 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 DKK1O94907 266 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 FSBPO95073 299 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 SPINK2P20155 84 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 RFC1P35251 1148 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 ADRA1BP35368 520 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 CCR5P51681 352 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 ARF5P84085 180 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 ATP11AP98196 1134 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 IQCB1Q15051 598 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 ZNF423Q2M1K9 1284 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 ANO6Q4KMQ2 910 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 WDR59Q6PJI9 974 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 SND1Q7KZF4 910 aaKnown RBP eCLIP14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 STRADAQ7RTN6 431 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 TFAP2DQ7Z6R9 452 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 GLRX5Q86SX6 157 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 NAXDQ8IW45 347 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 CCDC185Q8N715 623 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 MSANTD4Q8NCY6 345 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 C3orf20Q8ND61 904 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 NEK11Q8NG66 645 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 OR7D4Q8NG98 312 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 SNX19Q92543 992 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 GATA6Q92908 595 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 SLC6A18Q96N87 628 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 TTYH3Q9C0H2 523 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 OSBPL2Q9H1P3 480 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 TOR4AQ9NXH8 423 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 PCOLCE2Q9UKZ9 415 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 ANKRD6Q9Y2G4 727 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 PCDHGB2Q9Y5G2 931 aa14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 COL5A1P20908 1838 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-211ENST00000504318 ILVBLA1L0T0 632 aa14.33□□□□□ -0.12
PDLIM7-211ENST00000504318 FAM221BA6H8Z2 402 aa14.33□□□□□ -0.12
PDLIM7-211ENST00000504318 RTN2O75298 545 aa14.33□□□□□ -0.12
PDLIM7-211ENST00000504318 IL1BP01584 269 aa14.33□□□□□ -0.12
PDLIM7-211ENST00000504318 RHOCP08134 193 aa14.33□□□□□ -0.12
PDLIM7-211ENST00000504318 RRM1P23921 792 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms