RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 NPIPB13A6NJU9 1138 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 SAC3D1A6NKF1 404 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 NPIPB5A8MRT5 1133 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 NPIPB4C9JG80 1138 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 GTPBP1O00178 669 aaKnown RBP2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 PEX12O00623 359 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 DSCR3O14972 297 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 ANP32CO43423 234 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 TSPAN3O60637 253 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 CNOT3O75175 753 aaKnown RBP2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 RNF8O76064 485 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 TNNT1P13805 278 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 CD53P19397 219 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 TGM2P21980 687 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 PRPH2P23942 346 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 TACR3P29371 465 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 TUBP50607 506 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 YPEL5P62699 121 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 B4GALNT1Q00973 533 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 G3BP1Q13283 466 aaKnown RBP eCLIP2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 THOC5Q13769 683 aaKnown RBP2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 SLC4A8Q2Y0W8 1093 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 RUNDC3AQ59EK9 446 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 C9orf50Q5SZB4 431 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 ATG16L1Q676U5 607 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 MTFR2Q6P444 385 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 CLEC4GQ6UXB4 293 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 BBS12Q6ZW61 710 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 TMEM200AQ86VY9 491 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 HEATR4Q86WZ0 1026 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 RHPN2Q8IUC4 686 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 FOXP4Q8IVH2 680 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 UEVLDQ8IX04 471 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 VPS52Q8N1B4 723 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 NME8Q8N427 588 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 NAXEQ8NCW5 288 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 MPLKIPQ8TAP9 179 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 NR4A3Q92570 626 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 PIGKQ92643 395 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 HTRA1Q92743 480 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 P2RY11Q96G91 374 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 PPM1MQ96MI6 270 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 FCRL5Q96RD9 977 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 ZNF347Q96SE7 839 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 GATA5Q9BWX5 397 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 TM2D2Q9BX73 214 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 GPR63Q9BZJ6 419 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 TRIM31Q9BZY9 425 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 WASH6PQ9NQA3 447 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 POT1Q9NUX5 634 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 KLQ9UEF7 1012 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 ANAPC4Q9UJX5 808 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 SLC13A4Q9UKG4 626 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 PROCRQ9UNN8 238 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 GDAQ9Y2T3 454 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 LAS1LQ9Y4W2 734 aaKnown RBP2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 ZMYM2Q9UBW7 1377 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 EVPLQ92817 2033 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 EMSYQ7Z589 1322 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 LMTK3Q96Q04 1460 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 A6NLC8 198 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 SYN3O14994 580 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 INPPL1O15357 1258 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 PLAUP00749 431 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 HSP90AA1P07900 732 aaKnown RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 WEE2P0C1S8 567 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 AKR1A1P14550 325 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 PKMP14618 531 aaKnown RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 ST6GAL1P15907 406 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 HOXB9P17482 250 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 GSTM2P28161 218 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 AVPR2P30518 371 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 PGM1P36871 562 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 SOX2P48431 317 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 RPS6KA3P51812 740 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 ADPRHP54922 357 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 VAMP2P63027 116 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 TBX2Q13207 712 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 MTA1Q13330 715 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 ARL13AQ5H913 290 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 WDR45BQ5MNZ6 344 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 INTS11Q5TA45 600 aaKnown RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 ANO7Q6IWH7 933 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 DENND1BQ6P3S1 775 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 ZNF474Q6S9Z5 364 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 RBM44Q6ZP01 1051 aaKnown RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 RNF144BQ7Z419 303 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 MDGA2Q7Z553 956 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 PCGF5Q86SE9 256 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 SCN4BQ8IWT1 228 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 DCP1BQ8IZD4 617 aaKnown RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 EXD3Q8N9H8 876 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 TEX19Q8NA77 164 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 OSR1Q8TAX0 266 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 KAT2BQ92831 832 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 ATP2A3Q93084 1043 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 MASTLQ96GX5 879 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 MPP4Q96JB8 637 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms