RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 GUSBP11Q6P575 273 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 EFL1Q7Z2Z2 1120 aaKnown RBP9.39□□□□□ -0.91
CCDC171-209ENST00000498725 DSG4Q86SJ6 1040 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 DQX1Q8TE96 717 aaKnown RBP9.39□□□□□ -0.91
CCDC171-209ENST00000498725 FRS2Q8WU20 508 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 KCTD13Q8WZ19 329 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 TFAP2BQ92481 460 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 EXTL1Q92935 676 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 FAM149B1Q96BN6 582 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 SLC46A1Q96NT5 459 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 KDM4CQ9H3R0 1056 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 KLHL11Q9NVR0 708 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 NLGN3Q9NZ94 848 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 COX16Q9P0S2 106 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 TJP2Q9UDY2 1190 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 SLC25A13Q9UJS0 675 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 TPX2Q9ULW0 747 aaKnown RBP9.39□□□□□ -0.91
CCDC171-209ENST00000498725 TRAF3IP3Q9Y228 551 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 ENTPD2Q9Y5L3 495 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 U3KQA8 63 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 PIEZO2Q9H5I5 2752 aa9.39□□□□□ -0.91
CCDC171-209ENST00000498725 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 A0A1B0GVL5 298 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 NEMP2A6NFY4 417 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 KPNA3O00505 521 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 APOEP02649 317 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 BRD2P25440 801 aaKnown RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 RPL13P26373 211 aaKnown RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 NUDT1P36639 197 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 TAS2R38P59533 333 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 SRSF6Q13247 344 aaKnown RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 CLN3Q13286 438 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 ZNF177Q13360 481 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 DLG2Q15700 870 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 CBWD6Q4V339 395 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 CBWD3Q5JTY5 395 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 CBWD5Q5RIA9 395 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 PERM1Q5SV97 790 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 SYPL2Q5VXT5 272 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 SEL1L3Q68CR1 1132 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 USP53Q70EK8 1073 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 TAC4Q86UU9 113 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 JAMLQ86YT9 394 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 CCAR2Q8N163 923 aaKnown RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 SLC22A18ASQ8N1D0 253 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 TMEM174Q8WUU8 243 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 SNRNP27Q8WVK2 155 aaKnown RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 IRGQQ8WZA9 623 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 AZIN2Q96A70 460 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 CCDC97Q96F63 343 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 PRR11Q96HE9 360 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 SERPINB11Q96P15 392 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 CCNL2Q96S94 520 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 ST7Q9NRC1 585 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 EVA1BQ9NVM1 165 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 IPO11Q9UI26 975 aaKnown RBP9.38□□□□□ -0.91
CCDC171-209ENST00000498725 TLR6Q9Y2C9 796 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 PCDHB4Q9Y5E5 795 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 TRPM6Q9BX84 2022 aa9.38□□□□□ -0.91
CCDC171-209ENST00000498725 F5H5T6 163 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 SCAMP1O15126 338 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 MUSKO15146 869 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 SLC7A4O43246 635 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 FYNP06241 537 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 GP1BAP07359 652 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 FAM87AP0C7U9 286 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 HNRNPA2B1P22626 353 aaKnown RBP9.37□□□□□ -0.91
CCDC171-209ENST00000498725 GTF2H1P32780 548 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 HNRNPKP61978 463 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCDC171-209ENST00000498725 YWHAEP62258 255 aaKnown RBP9.37□□□□□ -0.91
CCDC171-209ENST00000498725 CENPCQ03188 943 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 TGIF1Q15583 401 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 ZNF284Q2VY69 593 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 LINC00303Q3SY05 128 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 PIP5KL1Q5T9C9 394 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 TMEM270Q6UE05 265 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 GCNT7Q6ZNI0 430 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 RBM44Q6ZP01 1051 aaKnown RBP9.37□□□□□ -0.91
CCDC171-209ENST00000498725 Q6ZSR6 202 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 HORMAD1Q86X24 394 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 SCML4Q8N228 414 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 ARL14Q8N4G2 192 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 TMEM145Q8NBT3 493 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 ZNF548Q8NEK5 533 aaPredicted RBP9.37□□□□□ -0.91
CCDC171-209ENST00000498725 LMX1AQ8TE12 382 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 SLC35F5Q8WV83 523 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 RNF34Q969K3 372 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 CCDC47Q96A33 483 aaKnown RBP9.37□□□□□ -0.91
CCDC171-209ENST00000498725 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 PREBQ9HCU5 417 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 DYRK4Q9NR20 520 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 PPM1HQ9ULR3 514 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 ZFR2Q9UPR6 939 aaKnown RBP9.37□□□□□ -0.91
CCDC171-209ENST00000498725 RP1P56715 2156 aa9.37□□□□□ -0.91
CCDC171-209ENST00000498725 ZFC3H1O60293 1989 aaKnown RBP9.36□□□□□ -0.91
CCDC171-209ENST00000498725 SCN8AQ9UQD0 1980 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 POM121BA6NF01 834 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 A6NNZ2 444 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms