RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 CNNM4Q6P4Q7 775 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 SLC27A1Q6PCB7 646 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 LYPD4Q6UWN0 246 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 UNC13DQ70J99 1090 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 MAEAQ7L5Y9 396 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 AHI1Q8N157 1196 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 GIPC2Q8TF65 315 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 MRPS31Q92665 395 aaKnown RBP5.43□□□□□ -1.54
FXN-205ENST00000498653 PRCCQ92733 491 aaPredicted RBP5.43□□□□□ -1.54
FXN-205ENST00000498653 KIFAP3Q92845 792 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 SNRNP40Q96DI7 357 aaKnown RBP5.43□□□□□ -1.54
FXN-205ENST00000498653 IFT74Q96LB3 600 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 DRC1Q96MC2 740 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 UROC1Q96N76 676 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 GSDMAQ96QA5 445 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 REEP2Q9BRK0 252 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 GTPBP4Q9BZE4 634 aaKnown RBP5.43□□□□□ -1.54
FXN-205ENST00000498653 TRIM9Q9C026 710 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 RBSNQ9H1K0 784 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 BLZF1Q9H2G9 400 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 ZHX3Q9H4I2 956 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 DHX33Q9H6R0 707 aaKnown RBP5.43□□□□□ -1.54
FXN-205ENST00000498653 USP29Q9HBJ7 922 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 CCM2LQ9NUG4 571 aaPredicted RBP5.43□□□□□ -1.54
FXN-205ENST00000498653 EXOC1Q9NV70 894 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 PANK4Q9NVE7 773 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 RMND1Q9NWS8 449 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 TMEM63CQ9P1W3 806 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 DCTN4Q9UJW0 460 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 TLK1Q9UKI8 766 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 ODF2LQ9ULJ1 636 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 ARHGAP26Q9UNA1 814 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.42□□□□□ -1.54
FXN-205ENST00000498653 STMND1H3BQB6 276 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 TLR4O00206 839 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 ASAP2O43150 1006 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 KLRC4O43908 158 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 SHOX2O60902 331 aaPredicted RBP5.42□□□□□ -1.54
FXN-205ENST00000498653 RPN1P04843 607 aaKnown RBP5.42□□□□□ -1.54
FXN-205ENST00000498653 USP17L7P0C7H9 530 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 JMJD7P0C870 316 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 SRGAP2CP0DJJ0 459 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 SOX18P35713 384 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 ADH7P40394 386 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 ZNF177Q13360 481 aaPredicted RBP5.42□□□□□ -1.54
FXN-205ENST00000498653 ENPP2Q13822 863 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 TFDP1Q14186 410 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 KCNB1Q14721 858 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 VEPH1Q14D04 833 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 PPP2R5AQ15172 486 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 CDKN3Q16667 212 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 KIAA0895LQ68EN5 471 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 SASS6Q6UVJ0 657 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 SND1Q7KZF4 910 aaKnown RBP eCLIP5.42□□□□□ -1.54
FXN-205ENST00000498653 EFL1Q7Z2Z2 1120 aaKnown RBP5.42□□□□□ -1.54
FXN-205ENST00000498653 MYCT1Q8N699 235 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 NAT16Q8N8M0 369 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 WFDC11Q8NEX6 87 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 GPBAR1Q8TDU6 330 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 CHTF18Q8WVB6 975 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 PSPC1Q8WXF1 523 aaKnown RBP5.42□□□□□ -1.54
FXN-205ENST00000498653 ERCC4Q92889 916 aaPredicted RBP5.42□□□□□ -1.54
FXN-205ENST00000498653 USP7Q93009 1102 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 PMEPA1Q969W9 287 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 TMEM143Q96AN5 459 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 SKA1Q96BD8 255 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 DNAJC19Q96DA6 116 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 DMRTB1Q96MA1 342 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 SEPT5Q99719 369 aaPredicted RBP5.42□□□□□ -1.54
FXN-205ENST00000498653 ANP32EQ9BTT0 268 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 POLR3FQ9H1D9 316 aaPredicted RBP5.42□□□□□ -1.54
FXN-205ENST00000498653 PARVGQ9HBI0 331 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 POLD4Q9HCU8 107 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 TRPC7Q9HCX4 862 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 XPNPEP1Q9NQW7 623 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 AASDHPPTQ9NRN7 309 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 ASF1BQ9NVP2 202 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 ABI2Q9NYB9 513 aaPredicted RBP5.42□□□□□ -1.54
FXN-205ENST00000498653 LARSQ9P2J5 1176 aaKnown RBP5.42□□□□□ -1.54
FXN-205ENST00000498653 KCNG1Q9UIX4 513 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 LOXL2Q9Y4K0 774 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 STON1Q9Y6Q2 735 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 MYO7BQ6PIF6 2116 aa5.42□□□□□ -1.54
FXN-205ENST00000498653 HRNRQ86YZ3 2850 aaPredicted RBP5.41□□□□□ -1.54
FXN-205ENST00000498653 TENM1Q9UKZ4 2725 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 UBR4Q5T4S7 5183 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 TRAV19A0A0A6YYK7 116 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 FRMD3A2A2Y4 597 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 C2orf78A6NCI8 922 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 CCDC169A6NNP5 214 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 H0YCG3 227 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 LEFTY2O00292 366 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 BIN1O00499 593 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 PODXLO00592 558 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 NTN3O00634 580 aaPredicted RBP5.41□□□□□ -1.54
FXN-205ENST00000498653 HOXC11O43248 304 aaPredicted RBP5.41□□□□□ -1.54
FXN-205ENST00000498653 RFPL1O75677 317 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 RHOBTB3O94955 611 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 KIF20AO95235 890 aa5.41□□□□□ -1.54
FXN-205ENST00000498653 ACADMP11310 421 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms