RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 HTR7P34969 479 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 PCK1P35558 622 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 MAPKAPK2P49137 400 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 STK19P49842 368 aaPredicted RBP11.53□□□□□ -0.56
ERCC8-208ENST00000497892 MRE11P49959 708 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 COPAP53621 1224 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 ST8SIA6P61647 398 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 FOXC1Q12948 553 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 HNRNPA1L2Q32P51 320 aaKnown RBP11.53□□□□□ -0.56
ERCC8-208ENST00000497892 USP39Q53GS9 565 aaKnown RBP11.53□□□□□ -0.56
ERCC8-208ENST00000497892 DAB2IPQ5VWQ8 1189 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 RWDD4Q6NW29 188 aaKnown RBP11.53□□□□□ -0.56
ERCC8-208ENST00000497892 ASCL5Q7RTU5 278 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 PSTKQ8IV42 348 aaKnown RBP11.53□□□□□ -0.56
ERCC8-208ENST00000497892 ZNF366Q8N895 744 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 ZNF564Q8TBZ8 553 aaPredicted RBP11.53□□□□□ -0.56
ERCC8-208ENST00000497892 ERLEC1Q96DZ1 483 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 PANX2Q96RD6 677 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 PSMB7Q99436 277 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 SNRNP25Q9BV90 132 aaKnown RBP11.53□□□□□ -0.56
ERCC8-208ENST00000497892 C2orf49Q9BVC5 232 aaPredicted RBP11.53□□□□□ -0.56
ERCC8-208ENST00000497892 MKRN2Q9H000 416 aaKnown RBP11.53□□□□□ -0.56
ERCC8-208ENST00000497892 MUC3BQ9H195 1237 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 SLC6A17Q9H1V8 727 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 FBRSQ9HAH7 460 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 TMEM248Q9NWD8 314 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 GPATCH2LQ9NWQ4 482 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 UVRAGQ9P2Y5 699 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 PCSK1NQ9UHG2 260 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 IP6K2Q9UHH9 426 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 USP18Q9UMW8 372 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 AP4E1Q9UPM8 1137 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 TNRC6BQ9UPQ9 1833 aaKnown RBP11.52□□□□□ -0.57
ERCC8-208ENST00000497892 A0A0D9SEW6 157 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 FGF10O15520 208 aaPredicted RBP11.52□□□□□ -0.57
ERCC8-208ENST00000497892 ZBTB24O43167 697 aaPredicted RBP11.52□□□□□ -0.57
ERCC8-208ENST00000497892 LCA5LO95447 670 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 TCF4P15884 667 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 EPHB2P29323 1055 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 P2RY2P41231 377 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 NUMBP49757 651 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 GNA12Q03113 381 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 CA9Q16790 459 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 MAP7D1Q3KQU3 841 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 ERMARDQ5T6L9 678 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 PRR23BQ6ZRT6 265 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 CEP68Q76N32 757 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 C11orf74Q86VG3 221 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 PGBD3Q8N328 593 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 RTL3Q8N8U3 475 aaKnown RBP11.52□□□□□ -0.57
ERCC8-208ENST00000497892 OR2T3Q8NH03 318 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 ZC3H10Q96K80 434 aaKnown RBP11.52□□□□□ -0.57
ERCC8-208ENST00000497892 BTBD6Q96KE9 485 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 SPACA7Q96KW9 195 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 RPL10LQ96L21 214 aaKnown RBP11.52□□□□□ -0.57
ERCC8-208ENST00000497892 DHX35Q9H5Z1 703 aaKnown RBP11.52□□□□□ -0.57
ERCC8-208ENST00000497892 PRDM16Q9HAZ2 1276 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 PRSS16Q9NQE7 514 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 NDFIP2Q9NV92 336 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 CTTNBP2NLQ9P2B4 639 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 VPS51Q9UID3 782 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 SLCO3A1Q9UIG8 710 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 SLC25A13Q9UJS0 675 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 HS3ST2Q9Y278 367 aa11.52□□□□□ -0.57
ERCC8-208ENST00000497892 EDDM13A0A1B0GTR0 161 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 TTC34A8MYJ7 566 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 MYO1FO00160 1098 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 DCLK1O15075 740 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 CREB3O43889 395 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 SIN3BO75182 1162 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 ZNF217O75362 1048 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 MTA2O94776 668 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 PROSCO94903 275 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 IL1R2P27930 398 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 ETFBP38117 255 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 ZNF135P52742 658 aaPredicted RBP11.51□□□□□ -0.57
ERCC8-208ENST00000497892 TPI1P60174 286 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 KRT83P78385 493 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 SLC25A11Q02978 314 aaKnown RBP11.51□□□□□ -0.57
ERCC8-208ENST00000497892 BYSLQ13895 437 aaKnown RBP11.51□□□□□ -0.57
ERCC8-208ENST00000497892 DPYSL2Q16555 572 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 LAIR1Q6GTX8 287 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 KIAA1324Q6UXG2 1013 aaKnown RBP11.51□□□□□ -0.57
ERCC8-208ENST00000497892 KBTBD6Q86V97 674 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 TMPRSS6Q8IU80 811 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 CCDC170Q8IYT3 715 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 OR7D4Q8NG98 312 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 FRS2Q8WU20 508 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 RFFLQ8WZ73 363 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 RSPH9Q9H1X1 276 aaPredicted RBP11.51□□□□□ -0.57
ERCC8-208ENST00000497892 MTG2Q9H4K7 406 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 CATSPERBQ9H7T0 1116 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 ATP13A1Q9HD20 1204 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 OSGEPQ9NPF4 335 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 USP36Q9P275 1121 aaKnown RBP11.51□□□□□ -0.57
ERCC8-208ENST00000497892 IMPACTQ9P2X3 320 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 SUN2Q9UH99 717 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 DNAI1Q9UI46 699 aa11.51□□□□□ -0.57
ERCC8-208ENST00000497892 RAB23Q9ULC3 237 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms