RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SEPT11Q9NVA2 429 aaKnown RBP16.13■□□□□ 0.17
HDAC4-213ENST00000496347 ZNF212Q9UDV6 495 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 VPS51Q9UID3 782 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 SNX10Q9Y5X0 201 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 KMT2BQ9UMN6 2715 aaPredicted RBP16.13■□□□□ 0.17
HDAC4-213ENST00000496347 ILVBLA1L0T0 632 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 C10orf142B7Z368 130 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 C1QTNF3-AMACRE9PGA6 284 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 GIPC1O14908 333 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 FSBPO95073 299 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 IL1BP01584 269 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 IGHV4-34P06331 123 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 KRT3P12035 628 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 VAV1P15498 845 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 ETFBP38117 255 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 ZNF165P49910 485 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 CDO1Q16878 200 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 CCDC14Q49A88 953 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 FILIP1LQ4L180 1135 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 ARTNQ5T4W7 220 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 MANEALQ5VSG8 457 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 NCEH1Q6PIU2 408 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 Q6ZVU0 165 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 OR2I1PQ8NGU4 316 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 CENPIQ92674 756 aaPredicted RBP16.12■□□□□ 0.17
HDAC4-213ENST00000496347 PSMB7Q99436 277 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 AGPAT1Q99943 283 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 SELENOOQ9BVL4 669 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 TM9SF3Q9HD45 589 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 RTN4Q9NQC3 1192 aaKnown RBP16.12■□□□□ 0.17
HDAC4-213ENST00000496347 TMPRSS4Q9NRS4 437 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 MPP6Q9NZW5 540 aa16.12■□□□□ 0.17
HDAC4-213ENST00000496347 ASPMQ8IZT6 3477 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 CXorf51AA0A1B0GTR3 108 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 A0A1W2PQC6 194 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 ANKRD62A6NC57 917 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 MCF2LO15068 1137 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 CD59P13987 128 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 NUMBP49757 651 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 CCR5P51681 352 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 GALCP54803 685 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 SCAPQ12770 1279 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 DLG2Q15700 870 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 C15orf59Q2T9L4 293 aaPredicted RBP16.11■□□□□ 0.17
HDAC4-213ENST00000496347 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 ACCSLQ4AC99 568 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 DNAJC24Q6P3W2 148 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 JOSD2Q8TAC2 188 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 FAM172AQ8WUF8 416 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 BAP1Q92560 729 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 NTAN1Q96AB6 310 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 ORAI3Q9BRQ5 295 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 FUCA2Q9BTY2 467 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 NEUROG2Q9H2A3 272 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 KDM4CQ9H3R0 1056 aa16.11■□□□□ 0.17
HDAC4-213ENST00000496347 A0A0D9SEW6 157 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 A0A1B0GTH6 734 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 A0A1W2PPC4 97 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 TCRBV5S1A1TA0A578 114 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 FAM47DPA6NHR8 397 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 SIGLEC16A6NMB1 481 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 SNAP91O60641 907 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 SRGAP2O75044 1071 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 SRCP12931 536 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 DESP17661 470 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 GPD1P21695 349 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 ADRA1BP35368 520 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 DRD3P35462 400 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 MAPKAPK2P49137 400 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 HDAC4P56524 1084 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 RACK1P63244 317 aaKnown RBP16.1■□□□□ 0.17
HDAC4-213ENST00000496347 RETSATQ6NUM9 610 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 C22orf39Q6P5X5 142 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 NAXDQ8IW45 347 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 ATP11CQ8NB49 1132 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 SYT11Q9BT88 431 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 CEP44Q9C0F1 390 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 OSBPL2Q9H1P3 480 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 GAREM1Q9H706 876 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 OR12D3Q9UGF7 316 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 PPM1HQ9ULR3 514 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 NEU3Q9UQ49 428 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 FNDC3AQ9Y2H6 1198 aaKnown RBP16.1■□□□□ 0.17
HDAC4-213ENST00000496347 FARP1Q9Y4F1 1045 aaPredicted RBP16.1■□□□□ 0.17
HDAC4-213ENST00000496347 PCDHGB2Q9Y5G2 931 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 SLCO1B1Q9Y6L6 691 aa16.1■□□□□ 0.17
HDAC4-213ENST00000496347 A0A1B0GVT2 93 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 TEX33O43247 280 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 LATO43561 262 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 PLRG1O43660 514 aaKnown RBP16.09■□□□□ 0.17
HDAC4-213ENST00000496347 RFC1P35251 1148 aaPredicted RBP16.09■□□□□ 0.17
HDAC4-213ENST00000496347 NUDT1P36639 197 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 CSNK1EP49674 416 aaKnown RBP16.09■□□□□ 0.17
HDAC4-213ENST00000496347 SERPINH1P50454 418 aaKnown RBP16.09■□□□□ 0.17
HDAC4-213ENST00000496347 ZNF143P52747 638 aaPredicted RBP16.09■□□□□ 0.17
HDAC4-213ENST00000496347 AIF1P55008 147 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 BNC1Q01954 994 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 GNA12Q03113 381 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 HLA-BQ31612 363 aa16.09■□□□□ 0.17
HDAC4-213ENST00000496347 AGBL4Q5VU57 503 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms