RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 NFKB1P19838 968 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 TYK2P29597 1187 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 PBLDP30039 288 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 TIE1P35590 1138 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 HSPA9P38646 679 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 CSKP41240 450 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 PSMD8P48556 350 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 MAPKAPK2P49137 400 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 ATXN3P54252 364 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 CDH17Q12864 832 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 CCDC157Q569K6 752 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 RASIP1Q5U651 963 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 BBS12Q6ZW61 710 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 TMEM139Q8IV31 216 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 MMGT1Q8N4V1 131 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 RTL3Q8N8U3 475 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 CYTH2Q99418 400 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 A0A0A0MRY4 1105 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 CARSP49589 748 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 SF3A3Q12874 501 aaKnown RBP eCLIP9.64□□□□□ -0.871e-7■■■■□ 19.8
GAPVD1-219ENST00000495955 CA9Q16790 459 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 UGP2Q16851 508 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 PPP1R15BQ5SWA1 713 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 FBXL22Q6P050 247 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 SPATA13Q96N96 652 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 FOPNLQ96NB1 174 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 TRIM54Q9BYV2 358 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 LATS2Q9NRM7 1088 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 CES2O00748 559 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 MAP3K7O43318 606 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 FAM189A1O60320 539 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 TAC1P20366 129 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 VIPR2P41587 438 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 ATP1A2P50993 1020 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 PARP6Q2NL67 630 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 XKR4Q5GH76 650 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 THEMIS2Q5TEJ8 643 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 MRNIPQ6NTE8 343 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 C1QTNF7Q9BXJ2 289 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 MAGEH1Q9H213 219 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 NMUR1Q9HB89 426 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 SUN2Q9UH99 717 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 COPEO14579 308 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 ZSCAN5DPP0CG00 497 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TYRP14679 529 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 ETS1P14921 441 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 MAP4P27816 1152 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 GABRB2P47870 512 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 HDAC4P56524 1084 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 YBEYP58557 167 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 PTK6Q13882 451 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 RAB42Q8N4Z0 105 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 ALG3Q92685 438 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 SKA1Q96BD8 255 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 FCF1Q9Y324 198 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 FIS1Q9Y3D6 152 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 RAD54BQ9Y620 910 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 HS3ST4Q9Y661 456 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 EVPLQ92817 2033 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 LIASO43766 372 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 PABPC1P11940 636 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 ASPHQ12797 758 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 LY6G5CQ5SRR4 150 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TRMT11Q7Z4G4 463 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TBC1D1Q86TI0 1168 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 CCT5P48643 541 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 GBE1Q04446 702 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 MORF4L2Q15014 288 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 ITPRIPL2Q3MIP1 535 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 AARS2Q5JTZ9 985 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 BBS7Q8IWZ6 715 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 ANKS4BQ8N8V4 417 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 RAB3IL1Q8TBN0 382 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 PIWIL1Q96J94 861 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 MLPHQ9BV36 600 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 SPATA16Q9BXB7 569 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 PKD2L2Q9NZM6 624 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 CYTH4Q9UIA0 394 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 NOVA2Q9UNW9 492 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TBC1D3DA0A087WVF3 549 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TBC1D3IA0A087WXS9 549 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TBC1D3EA0A087X179 549 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TBC1D3KA0A087X1G2 549 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TBC1D3FA6NER0 549 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TBC1D3LB9A6J9 549 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TBC1D3HP0C7X1 549 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 CDH5P33151 784 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 ABL2P42684 1182 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 USP10Q14694 798 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 SETMARQ53H47 684 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TBC1D3GQ6DHY5 549 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 NXNQ6DKJ4 435 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TBC1D3CQ6IPX1 549 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 DOK6Q6PKX4 331 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 ZNF662Q6ZS27 426 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 PTAR1Q7Z6K3 402 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TRIM48Q8IWZ4 208 aa9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 TBC1D3Q8IZP1 549 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-219ENST00000495955 WDTC1Q8N5D0 677 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms