RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 CCDC117Q8IWD4 279 aaPredicted RBP24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 GOLGA6L1Q8N7Z2 621 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 AGAP3Q96P47 875 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 SEMA4AQ9H3S1 761 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 MED4Q9NPJ6 270 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 TBC1D30Q9Y2I9 924 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 E7ESA3 106 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 TBL1XO60907 577 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 NUDT17P0C025 328 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 NTHL1P78549 312 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 PDIA2Q13087 525 aaKnown RBP24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 MPPE1Q53F39 396 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 TTC16Q8NEE8 873 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 ARHGEF2Q92974 986 aaKnown RBP24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 PWWP2AQ96N64 755 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 ZNF599Q96NL3 588 aa24.91■■□□□ 1.58
PPP1R3F-205ENST00000495799 GFRA2O00451 464 aa24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 NRG2O14511 850 aaPredicted RBP24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 ALOX15BO15296 676 aa24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 TTC4O95801 387 aa24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 CYBBP04839 570 aa24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 FAM193AP78312 1265 aa24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 MPP7Q5T2T1 576 aa24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 CROCCP2Q86T23 111 aa24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 TDRD5Q8NAT2 981 aaKnown RBP24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 SERPINB12Q96P63 405 aa24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 KIF9Q9HAQ2 790 aa24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 RBM22Q9NW64 420 aaKnown RBP eCLIP24.9■■□□□ 1.58
PPP1R3F-205ENST00000495799 NOTCH4Q99466 2003 aa24.89■■□□□ 1.58
PPP1R3F-205ENST00000495799 LUC7L3O95232 432 aaKnown RBP24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 MLNP12872 115 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 CEBPBP17676 345 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 NFKB1P19838 968 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 IFNAR2P48551 515 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 IFFO1Q0D2I5 559 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 MARC1Q5VT66 337 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 IL31Q6EBC2 164 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 TMC5Q6UXY8 1006 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 TMEM184AQ6ZMB5 413 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 BBS7Q8IWZ6 715 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 ZBED8Q8IZ13 594 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 BBS5Q8N3I7 341 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 ZSCAN18Q8TBC5 510 aaPredicted RBP24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 USP33Q8TEY7 942 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 USP13Q92995 863 aaPredicted RBP24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 LRRC39Q96DD0 335 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 NINJ2Q9NZG7 142 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 TBC1D14Q9P2M4 693 aa24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 AAR2Q9Y312 384 aaKnown RBP24.89■■□□□ 1.57
PPP1R3F-205ENST00000495799 GOLGA6L10A6NI86 522 aa24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 H0Y626 953 aa24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 PRAMEF11O60813 436 aa24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 TSHRP16473 764 aa24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 WEE1P30291 646 aa24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 SGSHP51688 502 aa24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 OXCT1P55809 520 aa24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 C12orf76Q8N812 135 aaPredicted RBP24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 FCRL5Q96RD9 977 aa24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 IGFLR1Q9H665 355 aa24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 GLOD4Q9HC38 313 aa24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 CHD5Q8TDI0 1954 aa24.88■■□□□ 1.57
PPP1R3F-205ENST00000495799 AP3B1O00203 1094 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 RFXAPO00287 272 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 CACNG3O60359 315 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 ANXA9O76027 345 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 ABHD2P08910 425 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 CD68P34810 354 aaPredicted RBP24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 ACVRL1P37023 503 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 TNK2Q07912 1038 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 USP4Q13107 963 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 CDH18Q13634 790 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 SLC29A2Q14542 456 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 BBS9Q3SYG4 887 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 FNBP1LQ5T0N5 605 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 TMCO4Q5TGY1 634 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 CARNMT1Q8N4J0 409 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 EFHBQ8N7U6 833 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 PDCD7Q8N8D1 485 aaKnown RBP24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 KIAA1958Q8N8K9 716 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 VN1R2Q8NFZ6 395 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 NUP210Q8TEM1 1887 aaPredicted RBP24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 DDI1Q8WTU0 396 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 PYROXD1Q8WU10 500 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 PABPC5Q96DU9 382 aaKnown RBP24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 SMG9Q9H0W8 520 aaKnown RBP24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 EPB41L4BQ9H329 900 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 FAM53CQ9NYF3 392 aa24.87■■□□□ 1.57
PPP1R3F-205ENST00000495799 J3KR12 359 aa24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 KDELR3O43731 214 aa24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 ACSL3O95573 720 aa24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 AP2A1O95782 977 aa24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 RFTN1Q14699 578 aaPredicted RBP24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 ZNF77Q15935 545 aa24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 KYNUQ16719 465 aa24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 CCDC38Q502W7 563 aa24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 RARS2Q5T160 578 aaKnown RBP24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 LRRC8BQ6P9F7 803 aa24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 TEX26Q8N6G2 289 aa24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 CNTD1Q8N815 330 aa24.86■■□□□ 1.57
PPP1R3F-205ENST00000495799 ATP11CQ8NB49 1132 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms