RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ADAMTS5Q9UNA0 930 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 CNTN6Q9UQ52 1028 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 FAM50BQ9Y247 325 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 SNX13Q9Y5W8 968 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 SCN1AP35498 2009 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 THP07101 528 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 IRF1P10914 325 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 ADRA1BP35368 520 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 ZBTB17Q13105 803 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 PARP6Q2NL67 630 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 AGKQ53H12 422 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 CFAP52Q8N1V2 620 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 C16orf70Q9BSU1 422 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 GATA5Q9BWX5 397 aaPredicted RBP13.7□□□□□ -0.22
GPC1-209ENST00000495100 ARHGEF38Q9NXL2 777 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 EURLQ9NYK6 297 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 COPG2Q9UBF2 871 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 TAF1LQ8IZX4 1826 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 AURKAO14965 403 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 CNMDO75829 334 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 SNAI1O95863 264 aaPredicted RBP13.7□□□□□ -0.22
GPC1-209ENST00000495100 CD4P01730 458 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 ITGB6P18564 788 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 PGAM1P18669 254 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 SLC26A2P50443 739 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 AQP4P55087 323 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 PAOXQ6QHF9 649 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 NPWQ8N729 165 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 MAPK15Q8TD08 544 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 EME1Q96AY2 570 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 TUBGCP5Q96RT8 1024 aa13.7□□□□□ -0.22
GPC1-209ENST00000495100 CD52P31358 61 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 DBN1Q16643 649 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 DNAL1Q4LDG9 190 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 ANKRD20A4Q4UJ75 823 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 SEL1L3Q68CR1 1132 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 NAPRTQ6XQN6 538 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 GK5Q6ZS86 529 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 PCDHAC1Q9H158 963 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 RGS17Q9UGC6 210 aaPredicted RBP13.69□□□□□ -0.22
GPC1-209ENST00000495100 A0A0G2JLL6 359 aaPredicted RBP13.69□□□□□ -0.22
GPC1-209ENST00000495100 TRIM13O60858 407 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 DNAJA2O60884 412 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 GFAPP14136 432 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 CCR1P32246 355 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 GJA5P36382 358 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 ETV4P43268 484 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 IDH3AP50213 366 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 PDAP1Q13442 181 aaKnown RBP13.69□□□□□ -0.22
GPC1-209ENST00000495100 SEMA5AQ13591 1074 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 PRRT2Q7Z6L0 340 aaPredicted RBP13.69□□□□□ -0.22
GPC1-209ENST00000495100 METTL23Q86XA0 190 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.69□□□□□ -0.22
GPC1-209ENST00000495100 CMTM5Q96DZ9 223 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 DNAJC1Q96KC8 554 aaKnown RBP13.69□□□□□ -0.22
GPC1-209ENST00000495100 CAAP1Q9H8G2 361 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 SP110Q9HB58 689 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 TRPC7Q9HCX4 862 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 DCDC2Q9UHG0 476 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 ST3GAL5Q9UNP4 418 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 HMX2A2RU54 273 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 DARSP14868 501 aaKnown RBP13.69□□□□□ -0.22
GPC1-209ENST00000495100 GRM5P41594 1212 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 TEDDM1Q5T9Z0 273 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 AP1ARQ63HQ0 302 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 PLEKHH3Q7Z736 793 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 BRD8Q9H0E9 1235 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 ALG9Q9H6U8 611 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.69□□□□□ -0.22
GPC1-209ENST00000495100 EGFL7Q9UHF1 273 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 ARHGAP26Q9UNA1 814 aa13.69□□□□□ -0.22
GPC1-209ENST00000495100 KIAA0100Q14667 2235 aaKnown RBP13.69□□□□□ -0.22
GPC1-209ENST00000495100 CXCL11O14625 94 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 PTPN3P26045 913 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 MRPS35P82673 323 aaKnown RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 SEMG2Q02383 582 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 TSTA3Q13630 321 aaPredicted RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 FAM83EQ2M2I3 478 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 SLC25A52Q3SY17 297 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 SGO1Q5FBB7 561 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 FSCBQ5H9T9 825 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 OLFML2BQ68BL8 750 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 TLDC1Q6P9B6 456 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 CLEC20AQ6ZU45 233 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 BHLHE22Q8NFJ8 381 aaPredicted RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 CDC26Q8NHZ8 85 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 FAM193BQ96PV7 902 aaPredicted RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 PRPF18Q99633 342 aaKnown RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 ABCG8Q9H221 673 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 BATF3Q9NR55 127 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 KIAA1257Q9ULG3 409 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 LRCH1Q9Y2L9 728 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 BCLAF3A2AJT9 711 aaKnown RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 FAM149AA5PLN7 773 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 JUNP05412 331 aaKnown RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 GRK4P32298 578 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 NOS2P35228 1153 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 FDFT1P37268 417 aa13.68□□□□□ -0.22
GPC1-209ENST00000495100 ZNF157P51786 506 aaPredicted RBP13.68□□□□□ -0.22
GPC1-209ENST00000495100 BLMHQ13867 455 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms