RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 METAP1P53582 386 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 BCAT1P54687 386 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 GALCP54803 685 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 PDE4CQ08493 712 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 C19orf57Q0VDD7 668 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 IFI16Q16666 785 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 GOLGA7BQ2TAP0 167 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 HES3Q5TGS1 186 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 ARHGAP17Q68EM7 881 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 ALKBH5Q6P6C2 394 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 NCEH1Q6PIU2 408 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 ZNF662Q6ZS27 426 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 KIAA0907Q7Z7F0 614 aaPredicted RBP12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 TMEM35BQ8NCS4 154 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 KIAA1524Q8TCG1 905 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 PLD4Q96BZ4 506 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 TMA16Q96EY4 203 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 UBL7Q96S82 380 aaPredicted RBP12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 NEUROG2Q9H2A3 272 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 OSGEPQ9NPF4 335 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 FBXL12Q9NXK8 326 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 INTS6Q9UL03 887 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 STRIP2Q9ULQ0 834 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 ADGRG1Q9Y653 693 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 AK5Q9Y6K8 562 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 TTC34A8MYJ7 566 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 KIF2AO00139 706 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 TIMM44O43615 452 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 RTN2O75298 545 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 LDOC1O95751 146 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 TUBB4AP04350 444 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 MMEP08473 750 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 DLDP09622 509 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 PLA2G2AP14555 144 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 BRD2P25440 801 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 C21orf59P57076 290 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 FMO1Q01740 532 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 ADIGQ0VDE8 80 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 KIF5AQ12840 1032 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 CNGA2Q16280 664 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 CLEC16AQ2KHT3 1053 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 FSCBQ5H9T9 825 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 CCDC122Q5T0U0 273 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 TAF3Q5VWG9 929 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 BSPRYQ5W0U4 402 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 PM20D1Q6GTS8 502 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 NADSYN1Q6IA69 706 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 TMPRSS12Q86WS5 348 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 CCAR2Q8N163 923 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 ZNF843Q8N446 348 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 SAP25Q8TEE9 199 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 CLEC4CQ8WTT0 213 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 SLC20A1Q8WUM9 679 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 ZNF606Q8WXB4 792 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 CTNNBL1Q8WYA6 563 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 LMLNQ96KR4 655 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 MRGPRX3Q96LB0 322 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 PRICKLE1Q96MT3 831 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 FCRL3Q96P31 734 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 CDK5RAP1Q96SZ6 601 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 ELF4Q99607 663 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 ACE2Q9BYF1 805 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 PCED1AQ9H1Q7 454 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 RSPH9Q9H1X1 276 aaPredicted RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 PABPC3Q9H361 631 aaKnown RBP12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 AASDHPPTQ9NRN7 309 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 SPTLC3Q9NUV7 552 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 PYCARDQ9ULZ3 195 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 MYO18BQ8IUG5 2567 aa12.12□□□□□ -0.47
CSNK1E-212ENST00000494610 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 A0A087X0T9 212 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 A0A1W2PPC4 97 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 A0A1W2PR77 199 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 ANKRD62A6NC57 917 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 ESPNB1AK53 854 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 M0QYV0 167 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 O00370 1275 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 DDX3XO00571 662 aaKnown RBP eCLIP12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 VILLO15195 856 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 RFPL3O75679 317 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 RNASEH2AO75792 299 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 CALB1P05937 261 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 ITGAVP06756 1048 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 H2AFZP0C0S5 128 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 FAM228BP0C875 321 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 LCP1P13796 627 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 VAV1P15498 845 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 ABCB4P21439 1286 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 CDH5P33151 784 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 MAGEA1P43355 309 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 ACADVLP49748 655 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 RGS7P49802 495 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 PPP2CBP62714 309 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 RACK1P63244 317 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 PPP2CAP67775 309 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 CENPCQ03188 943 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 FAM133BQ5BKY9 247 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 ADGRF1Q5T601 910 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 ZNF776Q68DI1 518 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms