RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 HEATR4Q86WZ0 1026 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 GAS2L3Q86XJ1 694 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 DENND1CQ8IV53 801 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 SYTL1Q8IYJ3 562 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 GRAMD1CQ8IYS0 662 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 GALNT15Q8N3T1 639 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 NAT8LQ8N9F0 302 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 ANKRD52Q8NB46 1076 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 MNS1Q8NEH6 495 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 BRSK1Q8TDC3 778 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 BPIFB1Q8TDL5 484 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 WIPF2Q8TF74 440 aaPredicted RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 TMEM171Q8WVE6 324 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 RUFY2Q8WXA3 655 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF606Q8WXB4 792 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 RFFLQ8WZ73 363 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 RUBCNQ92622 972 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 TAF4BQ92750 862 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 PHKBQ93100 1093 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 ITFG2Q969R8 447 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF845Q96IR2 970 aaPredicted RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 CNDP2Q96KP4 475 aaKnown RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 C7orf26Q96N11 449 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 FAM210AQ96ND0 272 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 EYA3Q99504 573 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 GPATCH1Q9BRR8 931 aaKnown RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 NTPCRQ9BSD7 190 aaKnown RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 DESI2Q9BSY9 194 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 EDEM3Q9BZQ6 932 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 ARHGAP39Q9C0H5 1083 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 MS4A7Q9GZW8 240 aaPredicted RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 BTBD1Q9H0C5 482 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 SUDS3Q9H7L9 328 aaPredicted RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 ARMT1Q9H993 441 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 MRPL44Q9H9J2 332 aaKnown RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 GRPEL1Q9HAV7 217 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 SEMA4BQ9NPR2 832 aaPredicted RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 VPS45Q9NRW7 570 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 TRMT1Q9NXH9 659 aaKnown RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 UTP6Q9NYH9 597 aaKnown RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 NKX1-2Q9UD57 310 aaPredicted RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 SUN2Q9UH99 717 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 VPS28Q9UK41 221 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 MAGED2Q9UNF1 606 aaPredicted RBP2.4□□□□□ -2.03
PTPN12-212ENST00000494248 COG5Q9UP83 839 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 MED16Q9Y2X0 877 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 SNX14Q9Y5W7 946 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 USP19O94966 1318 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 PASKQ96RG2 1323 aa2.4□□□□□ -2.03
PTPN12-212ENST00000494248 ATAD2BQ9ULI0 1458 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 CCDC196A0A1B0GTZ2 297 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 CCDC69A6NI79 296 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 B9A039 149 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 H0Y626 953 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 BTN3A1O00481 513 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 FYB1O15117 783 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 KPNA5O15131 536 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 SPTLC2O15270 562 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 NCK2O43639 380 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 DOK2O60496 412 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 ZC3H11AO75152 810 aaKnown RBP eCLIP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 BBOX1O75936 387 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 FGF18O76093 207 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 KIAA0754O94854 1291 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 GOSR1O95249 250 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 TGDSO95455 350 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 APBB3O95704 486 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 GUCA1CO95843 209 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 ADRB2P07550 413 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 SRGAP2BP0DMP2 458 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 CKMT1AP12532 417 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 IL11P20809 199 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 CNTFP26441 200 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 MSH2P43246 934 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 DIO1P49895 249 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 ALDH3A2P51648 485 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 BCAT1P54687 386 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 B4GALNT1Q00973 533 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 AKAP17AQ02040 695 aaKnown RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 TLE2Q04725 743 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 EFR3AQ14156 821 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 KRT32Q14532 448 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 POLD3Q15054 466 aaPredicted RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 POSTNQ15063 836 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 TAF5Q15542 800 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 INSCQ1MX18 579 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 PTCHD3Q3KNS1 767 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 ZACNQ401N2 412 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 AWAT1Q58HT5 328 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 EARS2Q5JPH6 523 aaKnown RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 ALKBH5Q6P6C2 394 aaKnown RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF783Q6ZMS7 281 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 RUFY3Q7L099 469 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 UNC45BQ8IWX7 931 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 RPAP2Q8IXW5 612 aaPredicted RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF619Q8N2I2 560 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 MPP5Q8N3R9 675 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 C12orf76Q8N812 135 aaPredicted RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 FAM71DQ8N9W8 422 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms